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2j1i

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{{Theoretical_model}}
{{Theoretical_model}}
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{{Seed}}
 
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[[Image:2j1i.png|left|200px]]
 
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==THE TRANSMEMBRANE DOMAIN OF PHOSPHOLEMMAN (FXYD1)==
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The line below this paragraph, containing "STRUCTURE_2j1i", creates the "Structure Box" on the page.
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<StructureSection load='2j1i' size='340' side='right'caption='[[2j1i]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J1I FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j1i FirstGlance], [https://www.ebi.ac.uk/pdbsum/2j1i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j1i ProSAT]</span></td></tr>
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</table>
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{{STRUCTURE_2j1i| PDB=2j1i | SCENE= }}
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Phospholemman (PLM) is a 72-residue bitopic cardiac transmembrane protein, which acts as a modulator of the Na(+)/K(+)-ATPase and the Na(+)/Ca(2+) exchanger and possibly forms taurine channels in nonheart tissue. This work presents a high resolution structural model obtained from a combination of site-specific infrared spectroscopy and experimentally constrained high throughput molecular dynamics (MD) simulations. Altogether, 37 experimental constraints, including nine long range orientational constraints, have been used during MD simulations in an explicit lipid bilayer/water system. The resulting tetrameric alpha-helical bundle has an average helix tilt of 7.3 degrees and a crossing angle close to 0 degrees . It does not reveal a hydrophilic pore, but instead strong interactions between various residues occlude any pore. The helix-helix packing is unusual, with Gly(19) and Gly(20) pointing to the outside of the helical bundle, facilitating potential interaction with other transmembrane proteins, thus providing a structural basis for the modulatory effect of PLM on the Na(+)/K(+)-ATPase. A two-stage model of interaction between PLM and the Na(+)/K(+)-ATPase is discussed involving PLM-ATPase interaction and subsequent formation of an unstable PLM trimer, which readily interacts with surrounding ATPase molecules. Further unconstrained MD simulations identified other packing models of PLM, one of which could potentially undergo a conformational transition to an open pore.
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===THE TRANSMEMBRANE DOMAIN OF PHOSPHOLEMMAN (FXYD1)===
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Phospholemman transmembrane structure reveals potential interactions with Na+/K+-ATPase.,Beevers AJ, Kukol A J Biol Chem. 2007 Nov 9;282(45):32742-8. Epub 2007 Aug 13. PMID:17698851<ref>PMID:17698851</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_17698851}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2j1i" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 17698851 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_17698851}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Theoretical Model]]
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J1I OCA].
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[[Category: Large Structures]]
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==Reference==
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<ref group="xtra">PMID:17698851</ref><references group="xtra"/>
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[[Category: Beevers, A J]]
[[Category: Beevers, A J]]
[[Category: Kukol, A]]
[[Category: Kukol, A]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 8 08:30:08 2010''
 

Current revision

Theoretical Model: The protein structure described on this page was determined theoretically, and hence should be interpreted with caution.

THE TRANSMEMBRANE DOMAIN OF PHOSPHOLEMMAN (FXYD1)

PDB ID 2j1i

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