This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1lgh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:06, 3 April 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1lgh.png|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF THE LIGHT-HARVESTING COMPLEX II (B800-850) FROM RHODOSPIRILLUM MOLISCHIANUM==
-
The line below this paragraph, containing "STRUCTURE_1lgh", creates the "Structure Box" on the page.
+
<StructureSection load='1lgh' size='340' side='right'caption='[[1lgh]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1lgh]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Magnetospirillum_molischianum Magnetospirillum molischianum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LGH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LGH FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene>, <scene name='pdbligand=DET:UNDECYLAMINE-N,N-DIMETHYL-N-OXIDE'>DET</scene>, <scene name='pdbligand=HTO:HEPTANE-1,2,3-TRIOL'>HTO</scene>, <scene name='pdbligand=LYC:LYCOPENE'>LYC</scene></td></tr>
-
{{STRUCTURE_1lgh| PDB=1lgh | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lgh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lgh OCA], [https://pdbe.org/1lgh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lgh RCSB], [https://www.ebi.ac.uk/pdbsum/1lgh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lgh ProSAT]</span></td></tr>
-
 
+
</table>
-
===CRYSTAL STRUCTURE OF THE LIGHT-HARVESTING COMPLEX II (B800-850) FROM RHODOSPIRILLUM MOLISCHIANUM===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/LHB1_MAGML LHB1_MAGML] Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_8736556}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 8736556 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lg/1lgh_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_8736556}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1LGH is a 8 chains structure with sequences from [http://en.wikipedia.org/wiki/Phaeospirillum_molischianum Phaeospirillum molischianum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LGH OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lgh ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:8736556</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Phaeospirillum molischianum]]
+
[[Category: Large Structures]]
-
[[Category: Hu, X.]]
+
[[Category: Magnetospirillum molischianum]]
-
[[Category: Koepke, J.]]
+
[[Category: Hu X]]
-
[[Category: Michel, H.]]
+
[[Category: Koepke J]]
-
[[Category: Schulten, K.]]
+
[[Category: Michel H]]
-
[[Category: Bacteriochlorophyll]]
+
[[Category: Schulten K]]
-
[[Category: Dexter energy transfer]]
+
-
[[Category: Foerster exciton transfer mechanism]]
+
-
[[Category: Light harvesting complex]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Photosynthesis]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 28 11:13:03 2010''
+

Current revision

CRYSTAL STRUCTURE OF THE LIGHT-HARVESTING COMPLEX II (B800-850) FROM RHODOSPIRILLUM MOLISCHIANUM

PDB ID 1lgh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools