3gbg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:53, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3gbg.png|left|200px]]
 
-
<!--
+
==Crystal Structure of ToxT from Vibrio Cholerae O395==
-
The line below this paragraph, containing "STRUCTURE_3gbg", creates the "Structure Box" on the page.
+
<StructureSection load='3gbg' size='340' side='right'caption='[[3gbg]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3gbg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O395 Vibrio cholerae O395]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GBG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GBG FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PAM:PALMITOLEIC+ACID'>PAM</scene></td></tr>
-
{{STRUCTURE_3gbg| PDB=3gbg | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gbg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gbg OCA], [https://pdbe.org/3gbg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gbg RCSB], [https://www.ebi.ac.uk/pdbsum/3gbg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gbg ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TCPN_VIBC3 TCPN_VIBC3] Probable regulatory protein for the tcp operon.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gb/3gbg_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gbg ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of ToxT from Vibrio Cholerae O395===
+
==See Also==
-
 
+
*[[ToxT|ToxT]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_20133655}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 20133655 is the PubMed ID number.
+
[[Category: Vibrio cholerae O395]]
-
-->
+
[[Category: Kull FJ]]
-
{{ABSTRACT_PUBMED_20133655}}
+
[[Category: Lowden MJ]]
-
 
+
-
==About this Structure==
+
-
3GBG is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae_o395 Vibrio cholerae o395]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GBG OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:20133655</ref><references group="xtra"/>
+
-
[[Category: Vibrio cholerae o395]]
+
-
[[Category: Kull, F J.]]
+
-
[[Category: Lowden, M J.]]
+
-
[[Category: Activator]]
+
-
[[Category: Arac family]]
+
-
[[Category: Cupin]]
+
-
[[Category: Cytoplasm]]
+
-
[[Category: Dna-binding]]
+
-
[[Category: Helix-turn-helix]]
+
-
[[Category: Transcription]]
+
-
[[Category: Transcription regulation]]
+
-
[[Category: Transcription regulator]]
+
-
[[Category: Virulence]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 28 11:16:55 2010''
+

Current revision

Crystal Structure of ToxT from Vibrio Cholerae O395

PDB ID 3gbg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools