This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3mpo
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3mpo is ON HOLD Authors: Zhang, Z., Burley, S. K, Swaminathan, S. Description: The crystal structure of hydrolase from Lactobacillus brevis ''Page...) |
|||
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | The | + | ==The crystal structure of a hydrolase from Lactobacillus brevis== |
| - | + | <StructureSection load='3mpo' size='340' side='right' caption='[[3mpo]], [[Resolution|resolution]] 2.90Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3mpo]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Lacba Lacba]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MPO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MPO FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HAD, LVIS_0481 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=387344 LACBA])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mpo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mpo OCA], [http://pdbe.org/3mpo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mpo RCSB], [http://www.ebi.ac.uk/pdbsum/3mpo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3mpo ProSAT]</span></td></tr> | |
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mp/3mpo_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mpo ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Lacba]] | ||
| + | [[Category: Burley, S K]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Swaminathan, S]] | ||
| + | [[Category: Zhang, Z]] | ||
| + | [[Category: Hydrolase]] | ||
| + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Sgx]] | ||
Current revision
The crystal structure of a hydrolase from Lactobacillus brevis
| |||||||||||

