This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3hx4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:02, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3hx4.png|left|200px]]
 
-
<!--
+
==Crystal structure of CDPK1 of Toxoplasma gondii, TGME49_101440, in presence of calcium==
-
The line below this paragraph, containing "STRUCTURE_3hx4", creates the "Structure Box" on the page.
+
<StructureSection load='3hx4' size='340' side='right'caption='[[3hx4]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3hx4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Toxoplasma_gondii Toxoplasma gondii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HX4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HX4 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3hx4| PDB=3hx4 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hx4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hx4 OCA], [https://pdbe.org/3hx4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hx4 RCSB], [https://www.ebi.ac.uk/pdbsum/3hx4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hx4 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9BJF5_TOXGO Q9BJF5_TOXGO]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hx/3hx4_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hx4 ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of CDPK1 of Toxoplasma gondii, TGME49_101440, in presence of calcium===
+
==See Also==
-
 
+
*[[Calcium-dependent protein kinase|Calcium-dependent protein kinase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3HX4 is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Toxoplasma_gondii Toxoplasma gondii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HX4 OCA].
+
[[Category: Large Structures]]
[[Category: Toxoplasma gondii]]
[[Category: Toxoplasma gondii]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Artz, J D.]]
+
[[Category: Artz JD]]
-
[[Category: Bochkarev, A.]]
+
[[Category: Bochkarev A]]
-
[[Category: Bountra, C.]]
+
[[Category: Bountra C]]
-
[[Category: Edwards, A M.]]
+
[[Category: Edwards AM]]
-
[[Category: Finnerty, P.]]
+
[[Category: Finnerty P]]
-
[[Category: Hassani, A A.]]
+
[[Category: Hassani AA]]
-
[[Category: He, H.]]
+
[[Category: He H]]
-
[[Category: Hui, R.]]
+
[[Category: Hui R]]
-
[[Category: Lin, Y H.]]
+
[[Category: Lin YH]]
-
[[Category: Lourido, S.]]
+
[[Category: Lourido S]]
-
[[Category: MacKenzie, F.]]
+
[[Category: MacKenzie F]]
-
[[Category: SGC, Structural Genomics Consortium.]]
+
[[Category: Sibley DL]]
-
[[Category: Sibley, D L.]]
+
[[Category: Sinestera G]]
-
[[Category: Sinestera, G.]]
+
[[Category: Vedadi M]]
-
[[Category: Vedadi, M.]]
+
[[Category: Wasney G]]
-
[[Category: Wasney, G.]]
+
[[Category: Weigelt J]]
-
[[Category: Weigelt, J.]]
+
[[Category: Wernimont AK]]
-
[[Category: Wernimont, A K.]]
+
[[Category: Xiao T]]
-
[[Category: Xiao, T.]]
+
-
[[Category: Atp-binding]]
+
-
[[Category: Calcium]]
+
-
[[Category: Cdpk]]
+
-
[[Category: Kinase]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Protist]]
+
-
[[Category: Serine/threonine-protein kinase]]
+
-
[[Category: Sgc]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structural genomics consortium]]
+
-
[[Category: Toxoplasma]]
+
-
[[Category: Transferase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 12 10:27:42 2010''
+

Current revision

Crystal structure of CDPK1 of Toxoplasma gondii, TGME49_101440, in presence of calcium

PDB ID 3hx4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3hx4"
Personal tools