3muq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: {{Seed}} 200px <!-- The line below this paragraph, containing "STRUCTURE_3muq", creates the "Structure Box" on the page. You may change the PDB parameter (which se...)
Current revision (06:30, 27 November 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3muq.jpg|left|200px]]
 
-
<!--
+
==The crystal structure of a conserved functionally unknown protein from Vibrio parahaemolyticus RIMD 2210633==
-
The line below this paragraph, containing "STRUCTURE_3muq", creates the "Structure Box" on the page.
+
<StructureSection load='3muq' size='340' side='right'caption='[[3muq]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3muq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MUQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MUQ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.053&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3muq| PDB=3muq | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3muq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3muq OCA], [https://pdbe.org/3muq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3muq RCSB], [https://www.ebi.ac.uk/pdbsum/3muq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3muq ProSAT]</span></td></tr>
-
 
+
</table>
-
===The crystal structure of a conserved functionally unknown protein from Vibrio parahaemolyticus RIMD 2210633===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q87PK2_VIBPA Q87PK2_VIBPA]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3MUQ is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MUQ OCA].
+
Check<jmol>
-
[[Category: Vibrio parahaemolyticus]]
+
<jmolCheckbox>
-
[[Category: Bearden, J.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mu/3muq_consurf.spt"</scriptWhenChecked>
-
[[Category: Joachimiak, A.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Tan, K.]]
+
</jmolCheckbox>
-
[[Category: Wu, R.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3muq ConSurf].
-
[[Category: Mcsg]]
+
<div style="clear:both"></div>
-
[[Category: Midwest center for structural genomic]]
+
__TOC__
-
[[Category: Protein structure initiative]]
+
</StructureSection>
-
[[Category: Psi-2]]
+
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
+
[[Category: Vibrio parahaemolyticus RIMD 2210633]]
-
[[Category: Unknown function]]
+
[[Category: Bearden J]]
-
 
+
[[Category: Joachimiak A]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 12 11:28:06 2010''
+
[[Category: Tan K]]
 +
[[Category: Wu R]]

Current revision

The crystal structure of a conserved functionally unknown protein from Vibrio parahaemolyticus RIMD 2210633

PDB ID 3muq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools