This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3juj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:29, 20 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3juj.png|left|200px]]
 
-
<!--
+
==The crystal structure of apo- UDP-glucose pyrophosphorylase==
-
The line below this paragraph, containing "STRUCTURE_3juj", creates the "Structure Box" on the page.
+
<StructureSection load='3juj' size='340' side='right'caption='[[3juj]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3juj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JUJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JUJ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3juj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3juj OCA], [https://pdbe.org/3juj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3juj RCSB], [https://www.ebi.ac.uk/pdbsum/3juj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3juj ProSAT]</span></td></tr>
-
{{STRUCTURE_3juj| PDB=3juj | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===The crystal structure of apo- UDP-glucose pyrophosphorylase===
+
[https://www.uniprot.org/uniprot/O25363_HELPY O25363_HELPY]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_20238176}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 20238176 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ju/3juj_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_20238176}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3juj ConSurf].
-
3JUJ is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JUJ OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:20238176</ref><references group="xtra"/>
+
[[Category: Helicobacter pylori 26695]]
-
[[Category: Helicobacter pylori]]
+
[[Category: Large Structures]]
-
[[Category: UTP--glucose-1-phosphate uridylyltransferase]]
+
[[Category: Kim H]]
-
[[Category: Kim, H.]]
+
[[Category: Kim KK]]
-
[[Category: Kim, K K.]]
+
-
[[Category: Helicobacter pylori]]
+
-
[[Category: Transferase]]
+
-
[[Category: Udp-glucose pyrophosphorylase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu May 20 09:08:06 2010''
+

Current revision

The crystal structure of apo- UDP-glucose pyrophosphorylase

PDB ID 3juj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3juj"
Personal tools