This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2jvl
From Proteopedia
(Difference between revisions)
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
| - | [[Image:2jvl.png|left|200px]] | ||
| - | + | ==NMR structure of the C-terminal domain of MBF1 of Trichoderma reesei== | |
| - | + | <StructureSection load='2jvl' size='340' side='right'caption='[[2jvl]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2jvl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichoderma_reesei Trichoderma reesei]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JVL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JVL FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jvl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jvl OCA], [https://pdbe.org/2jvl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jvl RCSB], [https://www.ebi.ac.uk/pdbsum/2jvl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jvl ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/D0VWW6_HYPJE D0VWW6_HYPJE] Transcriptional coactivator that stimulates transcriptional activity by bridging regulatory proteins and TBP, thereby recruiting TBP to promoters occupied by DNA-binding regulators.[ARBA:ARBA00002191] | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | == | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jv/2jvl_consurf.spt"</scriptWhenChecked> | |
| - | == | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | < | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | + | </jmolCheckbox> | |
| - | [ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jvl ConSurf]. |
| - | [ | + | <div style="clear:both"></div> |
| - | [ | + | __TOC__ |
| - | + | </StructureSection> | |
| - | [ | + | [[Category: Large Structures]] |
| - | [ | + | |
| - | [[ | + | |
| - | [ | + | |
| - | [[ | + | |
| - | [ | + | |
| - | + | ||
| - | [[Category: | + | |
[[Category: Trichoderma reesei]] | [[Category: Trichoderma reesei]] | ||
| - | + | [[Category: Camilo CM]] | |
| - | + | [[Category: Chambergo FS]] | |
| + | [[Category: El-Dorry H]] | ||
| + | [[Category: Farah CS]] | ||
| + | [[Category: Kopke Salinas R]] | ||
| + | [[Category: Tomaselli S]] | ||
| + | [[Category: Valencia EY]] | ||
Current revision
NMR structure of the C-terminal domain of MBF1 of Trichoderma reesei
| |||||||||||
