3lr5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:22, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3lr5.jpg|left|200px]]
 
-
<!--
+
==Periplasmic domain of the risS sensor protein from Burkholderia pseudomallei, iodide phased at neutral pH==
-
The line below this paragraph, containing "STRUCTURE_3lr5", creates the "Structure Box" on the page.
+
<StructureSection load='3lr5' size='340' side='right'caption='[[3lr5]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3lr5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LR5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LR5 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
-
{{STRUCTURE_3lr5| PDB=3lr5 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lr5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lr5 OCA], [https://pdbe.org/3lr5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lr5 RCSB], [https://www.ebi.ac.uk/pdbsum/3lr5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lr5 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Periplasmic domain of the risS sensor protein from Burkholderia pseudomallei, iodide phased at neutral pH===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q63T74_BURPS Q63T74_BURPS]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3LR5 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LR5 OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lr/3lr5_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lr5 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Burkholderia pseudomallei]]
[[Category: Burkholderia pseudomallei]]
-
[[Category: Histidine kinase]]
+
[[Category: Large Structures]]
-
[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]
+
-
[[Category: Atp-binding]]
+
-
[[Category: Burkholderia]]
+
-
[[Category: Histidine kinase]]
+
-
[[Category: Iodide phased]]
+
-
[[Category: Kinase]]
+
-
[[Category: Melioidosis]]
+
-
[[Category: Membrane]]
+
-
[[Category: Niaid]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Ph]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Seattle structural genomics center for infectious disease]]
+
-
[[Category: Sensor protein]]
+
-
[[Category: Ssgcid]]
+
-
[[Category: Transferase]]
+
-
[[Category: Transmembrane]]
+
-
[[Category: Two-component regulatory system]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 16 08:40:36 2010''
+

Current revision

Periplasmic domain of the risS sensor protein from Burkholderia pseudomallei, iodide phased at neutral pH

PDB ID 3lr5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools