This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3mse

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:26, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3mse.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of C-terminal domain of PF110239.==
-
The line below this paragraph, containing "STRUCTURE_3mse", creates the "Structure Box" on the page.
+
<StructureSection load='3mse' size='340' side='right'caption='[[3mse]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3mse]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MSE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MSE FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3mse| PDB=3mse | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mse FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mse OCA], [https://pdbe.org/3mse PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mse RCSB], [https://www.ebi.ac.uk/pdbsum/3mse PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mse ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of C-terminal domain of PF110239.===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q8IID5_PLAF7 Q8IID5_PLAF7]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3MSE is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MSE OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ms/3mse_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mse ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Plasmodium falciparum]]
[[Category: Plasmodium falciparum]]
-
[[Category: Amani, M.]]
+
[[Category: Amani M]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Artz, J D.]]
+
[[Category: Artz JD]]
-
[[Category: Bochkarev, A.]]
+
[[Category: Bochkarev A]]
-
[[Category: Bountra, C.]]
+
[[Category: Bountra C]]
-
[[Category: Edwards, A M.]]
+
[[Category: Edwards AM]]
-
[[Category: Hui, R.]]
+
[[Category: Hui R]]
-
[[Category: Hutchinson, A.]]
+
[[Category: Hutchinson A]]
-
[[Category: Lin, Y H.]]
+
[[Category: Lin YH]]
-
[[Category: Neculai, A M.]]
+
[[Category: Neculai AM]]
-
[[Category: SGC, Structural Genomics Consortium.]]
+
[[Category: Sullivan H]]
-
[[Category: Sullivan, H.]]
+
[[Category: Tempel W]]
-
[[Category: Tempel, W.]]
+
[[Category: Weadge J]]
-
[[Category: Weadge, J.]]
+
[[Category: Weigelt J]]
-
[[Category: Weigelt, J.]]
+
[[Category: Wernimont AK]]
-
[[Category: Wernimont, A K.]]
+
-
[[Category: Cdpk]]
+
-
[[Category: Malaria]]
+
-
[[Category: Sgc]]
+
-
[[Category: Structural genomics consortium]]
+
-
[[Category: Transferase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 23 08:52:18 2010''
+

Current revision

Crystal structure of C-terminal domain of PF110239.

PDB ID 3mse

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools