2kwc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:37, 15 May 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2kwc.png|left|200px]]
 
-
<!--
+
==The NMR structure of the autophagy-related protein Atg8==
-
The line below this paragraph, containing "STRUCTURE_2kwc", creates the "Structure Box" on the page.
+
<StructureSection load='2kwc' size='340' side='right'caption='[[2kwc]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2kwc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KWC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KWC FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kwc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kwc OCA], [https://pdbe.org/2kwc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kwc RCSB], [https://www.ebi.ac.uk/pdbsum/2kwc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kwc ProSAT]</span></td></tr>
-
{{STRUCTURE_2kwc| PDB=2kwc | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ATG8_YEAST ATG8_YEAST] Involved in cytoplasm to vacuole transport (Cvt) vesicles and autophagosomes formation. With ATG4, may mediate the delivery of the vesicles and autophagosomes to the vacuole via the microtubule cytoskeleton. Participates also in membrane fusion events that take place in the early secretory pathway.<ref>PMID:8224160</ref> <ref>PMID:7593182</ref> <ref>PMID:9649430</ref> <ref>PMID:10525546</ref> <ref>PMID:10681575</ref> <ref>PMID:10837468</ref> <ref>PMID:11038174</ref> <ref>PMID:11100732</ref> <ref>PMID:11149920</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kw/2kwc_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kwc ConSurf].
 +
<div style="clear:both"></div>
-
===The NMR structure of the autophagy-related protein Atg8===
+
==See Also==
-
 
+
*[[Autophagy-related protein 3D structures|Autophagy-related protein 3D structures]]
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
2KWC is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KWC OCA].
+
__TOC__
-
 
+
</StructureSection>
-
==Reference==
+
[[Category: Large Structures]]
-
<ref group="xtra">PMID:20428927</ref><references group="xtra"/>
+
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Adachi, W.]]
+
[[Category: Adachi W]]
-
[[Category: Fujioka, Y.]]
+
[[Category: Fujioka Y]]
-
[[Category: Inagaki, F.]]
+
[[Category: Inagaki F]]
-
[[Category: Kumeta, H.]]
+
[[Category: Kumeta H]]
-
[[Category: Nakatogawa, H.]]
+
[[Category: Nakatogawa H]]
-
[[Category: Noda, N N.]]
+
[[Category: Noda NN]]
-
[[Category: Ogura, K.]]
+
[[Category: Ogura K]]
-
[[Category: Ohsumi, Y.]]
+
[[Category: Ohsumi Y]]
-
[[Category: Watanabe, M.]]
+
[[Category: Watanabe M]]
-
[[Category: Yamaguchi, M.]]
+
[[Category: Yamaguchi M]]
-
[[Category: Atg8]]
+
-
[[Category: Autophagy]]
+
-
[[Category: Protein transport]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 30 13:27:00 2010''
+

Current revision

The NMR structure of the autophagy-related protein Atg8

PDB ID 2kwc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2kwc"
Personal tools