2x9z

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{{Seed}}
 
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[[Image:2x9z.jpg|left|200px]]
 
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==STRUCTURE OF THE PILUS BACKBONE (RRGB) FROM STREPTOCOCCUS PNEUMONIAE==
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The line below this paragraph, containing "STRUCTURE_2x9z", creates the "Structure Box" on the page.
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<StructureSection load='2x9z' size='340' side='right'caption='[[2x9z]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2x9z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X9Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X9Z FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_2x9z| PDB=2x9z | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x9z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x9z OCA], [https://pdbe.org/2x9z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x9z RCSB], [https://www.ebi.ac.uk/pdbsum/2x9z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x9z ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x9/2x9z_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2x9z ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Streptococcus pneumoniae, like many other Gram-positive bacteria, assembles long filamentous pili on their surface through which they adhere to host cells. Pneumococcal pili are formed by a backbone, consisting of the repetition of the major component RrgB, and two accessory proteins (RrgA and RrgC). Here we reconstruct by transmission electron microscopy and single particle image reconstruction method the three dimensional arrangement of two neighbouring RrgB molecules, which represent the minimal repetitive structural domain of the native pilus. The crystal structure of the D2-D4 domains of RrgB was solved at 1.6 A resolution. Rigid-body fitting of the X-ray coordinates into the electron density map enabled us to define the arrangement of the backbone subunits into the S. pneumoniae native pilus. The quantitative fitting provide evidence that the pneumococcal pilus consists uniquely of RrgB monomers assembled in a head-to-tail organization. The presence of short intra-subunit linker regions connecting neighbouring domains provides the molecular basis for the intrinsic pilus flexibility.
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===STRUCTURE OF THE PILUS BACKBONE (RRGB) FROM STREPTOCOCCUS PNEUMONIAE===
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Supramolecular organization of the repetitive backbone unit of the Streptococcus pneumoniae pilus.,Spraggon G, Koesema E, Scarselli M, Malito E, Biagini M, Norais N, Emolo C, Barocchi MA, Giusti F, Hilleringmann M, Rappuoli R, Lesley S, Covacci A, Masignani V, Ferlenghi I PLoS One. 2010 Jun 15;5(6):e10919. PMID:20559564<ref>PMID:20559564</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_20559564}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2x9z" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 20559564 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_20559564}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2X9Z is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X9Z OCA].
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[[Category: Streptococcus pneumoniae TIGR4]]
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[[Category: Barocchi MA]]
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==Reference==
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[[Category: Biagini M]]
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<ref group="xtra">PMID:20559564</ref><references group="xtra"/>
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[[Category: Covacci A]]
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[[Category: Streptococcus pneumoniae]]
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[[Category: Emolo C]]
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[[Category: Barocchi, M A.]]
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[[Category: Ferlenghi I]]
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[[Category: Biagini, M.]]
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[[Category: Giusti F]]
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[[Category: Covacci, A.]]
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[[Category: Hilleringmann M]]
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[[Category: Emolo, C.]]
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[[Category: Koesema E]]
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[[Category: Ferlenghi, I.]]
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[[Category: Lesley S]]
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[[Category: Giusti, F.]]
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[[Category: Malito E]]
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[[Category: Hilleringmann, M.]]
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[[Category: Masignani V]]
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[[Category: Koesema, E.]]
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[[Category: Norais N]]
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[[Category: Lesley, S.]]
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[[Category: Rappuoli R]]
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[[Category: Malito, E.]]
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[[Category: Scarselli M]]
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[[Category: Masignani, V.]]
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[[Category: Spraggon G]]
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[[Category: Norais, N.]]
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[[Category: Rappuoli, R.]]
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[[Category: Scarselli, M.]]
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[[Category: Spraggon, G.]]
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[[Category: Cell adhesion]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 30 13:44:55 2010''
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Current revision

STRUCTURE OF THE PILUS BACKBONE (RRGB) FROM STREPTOCOCCUS PNEUMONIAE

PDB ID 2x9z

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