This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3mt1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (20:09, 4 August 2016) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3mt1.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of putative carboxynorspermidine decarboxylase protein from Sinorhizobium meliloti==
-
The line below this paragraph, containing "STRUCTURE_3mt1", creates the "Structure Box" on the page.
+
<StructureSection load='3mt1' size='340' side='right' caption='[[3mt1]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3mt1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_9930 Atcc 9930]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MT1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MT1 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
-->
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3mt1| PDB=3mt1 | SCENE= }}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nspC, RB1551, SM_b21631, SMb21631 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=382 ATCC 9930])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mt1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mt1 OCA], [http://pdbe.org/3mt1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mt1 RCSB], [http://www.ebi.ac.uk/pdbsum/3mt1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3mt1 ProSAT]</span></td></tr>
-
===Crystal structure of putative carboxynorspermidine decarboxylase protein from Sinorhizobium meliloti===
+
</table>
-
 
+
== Function ==
-
 
+
[[http://www.uniprot.org/uniprot/Q92TG9_RHIME Q92TG9_RHIME]] Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine (By similarity).[PIRNR:PIRNR038941]
-
==About this Structure==
+
== Evolutionary Conservation ==
-
3MT1 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Sinorhizobium_meliloti Sinorhizobium meliloti]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MT1 OCA].
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Sinorhizobium meliloti]]
+
Check<jmol>
-
[[Category: Chang, C.]]
+
<jmolCheckbox>
-
[[Category: Chin, S.]]
+
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mt/3mt1_consurf.spt"</scriptWhenChecked>
-
[[Category: Cui, H.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Edwards, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Joachimiak, A.]]
+
</jmolCheckbox>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mt1 ConSurf].
-
[[Category: Savchenko, A.]]
+
<div style="clear:both"></div>
-
[[Category: Xu, X.]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Atcc 9930]]
 +
[[Category: Chang, C]]
 +
[[Category: Chin, S]]
 +
[[Category: Cui, H]]
 +
[[Category: Edwards, A]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Structural genomic]]
 +
[[Category: Savchenko, A]]
 +
[[Category: Xu, X]]
[[Category: Carboxynorspermidine decarboxylase]]
[[Category: Carboxynorspermidine decarboxylase]]
[[Category: Lyase]]
[[Category: Lyase]]
[[Category: Mcsg]]
[[Category: Mcsg]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi2]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 30 13:49:53 2010''
+

Current revision

Crystal structure of putative carboxynorspermidine decarboxylase protein from Sinorhizobium meliloti

3mt1, resolution 2.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3mt1"
Personal tools