2id3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:13, 31 March 2021) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2id3.png|left|200px]]
 
-
<!--
+
==Crystal structure of transcriptional regulator SCO5951 from Streptomyces coelicolor A3(2)==
-
The line below this paragraph, containing "STRUCTURE_2id3", creates the "Structure Box" on the page.
+
<StructureSection load='2id3' size='340' side='right'caption='[[2id3]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2id3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"actinomyces_coelicolor"_(muller_1908)_lieske_1921 "actinomyces coelicolor" (muller 1908) lieske 1921]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ID3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ID3 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
-->
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2id3| PDB=2id3 | SCENE= }}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SCO5951 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1902 "Actinomyces coelicolor" (Muller 1908) Lieske 1921])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2id3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2id3 OCA], [https://pdbe.org/2id3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2id3 RCSB], [https://www.ebi.ac.uk/pdbsum/2id3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2id3 ProSAT], [https://www.topsan.org/Proteins/MCSG/2id3 TOPSAN]</span></td></tr>
-
===Crystal structure of transcriptional regulator SCO5951 from Streptomyces coelicolor A3(2)===
+
</table>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2ID3 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ID3 OCA].
+
<jmolCheckbox>
-
[[Category: Streptomyces coelicolor]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/id/2id3_consurf.spt"</scriptWhenChecked>
-
[[Category: Chruszcz, M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Cymborowski, M.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Edwards, A.]]
+
</jmolCheckbox>
-
[[Category: Grabowski, M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2id3 ConSurf].
-
[[Category: Gu, J.]]
+
<div style="clear:both"></div>
-
[[Category: Joachimiak, A.]]
+
__TOC__
-
[[Category: Koclega, K D.]]
+
</StructureSection>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Large Structures]]
-
[[Category: Minor, W.]]
+
[[Category: Chruszcz, M]]
-
[[Category: Savchenko, A.]]
+
[[Category: Cymborowski, M]]
-
[[Category: Xu, X.]]
+
[[Category: Edwards, A]]
 +
[[Category: Grabowski, M]]
 +
[[Category: Gu, J]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Koclega, K D]]
 +
[[Category: Structural genomic]]
 +
[[Category: Minor, W]]
 +
[[Category: Savchenko, A]]
 +
[[Category: Xu, X]]
[[Category: Mcsg]]
[[Category: Mcsg]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
[[Category: Transcription]]
[[Category: Transcription]]
[[Category: Transcriptional regulator]]
[[Category: Transcriptional regulator]]
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 14 15:57:17 2010''
 

Current revision

Crystal structure of transcriptional regulator SCO5951 from Streptomyces coelicolor A3(2)

PDB ID 2id3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools