2xio

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:40, 10 November 2021) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2xio.jpg|left|200px]]
 
-
<!--
+
==Structure of putative deoxyribonuclease TATDN1 isoform a==
-
The line below this paragraph, containing "STRUCTURE_2xio", creates the "Structure Box" on the page.
+
<StructureSection load='2xio' size='340' side='right'caption='[[2xio]], [[Resolution|resolution]] 1.19&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2xio]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XIO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XIO FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xio FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xio OCA], [https://pdbe.org/2xio PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xio RCSB], [https://www.ebi.ac.uk/pdbsum/2xio PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xio ProSAT]</span></td></tr>
-
{{STRUCTURE_2xio| PDB=2xio | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===STRUCTURE OF PUTATIVE DEOXYRIBONUCLEASE TATDN1 ISOFORM A===
+
[[https://www.uniprot.org/uniprot/TATD1_HUMAN TATD1_HUMAN]] Putative deoxyribonuclease (By similarity).
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2XIO is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XIO OCA].
+
<jmolCheckbox>
-
[[Category: Homo sapiens]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xi/2xio_consurf.spt"</scriptWhenChecked>
-
[[Category: Arrowsmith, C H.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Bountra, C.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Cocking, R.]]
+
</jmolCheckbox>
-
[[Category: Edwards, A M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2xio ConSurf].
-
[[Category: Kavanagh, K L.]]
+
<div style="clear:both"></div>
-
[[Category: Krojer, T.]]
+
__TOC__
-
[[Category: Muniz, J R.C.]]
+
</StructureSection>
-
[[Category: Oppermann, U.]]
+
[[Category: Human]]
-
[[Category: Puranik, S.]]
+
[[Category: Large Structures]]
-
[[Category: Raynor, J.]]
+
[[Category: Arrowsmith, C H]]
-
[[Category: Vollmar, M.]]
+
[[Category: Bountra, C]]
-
[[Category: Vondelft, F.]]
+
[[Category: Cocking, R]]
-
[[Category: Weigelt, J.]]
+
[[Category: Delft, F von]]
-
[[Category: Yue, W W.]]
+
[[Category: Edwards, A M]]
 +
[[Category: Kavanagh, K L]]
 +
[[Category: Krojer, T]]
 +
[[Category: Muniz, J R.C]]
 +
[[Category: Oppermann, U]]
 +
[[Category: Puranik, S]]
 +
[[Category: Raynor, J]]
 +
[[Category: Vollmar, M]]
 +
[[Category: Weigelt, J]]
 +
[[Category: Yue, W W]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Nuclease]]
[[Category: Nuclease]]
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 14 16:17:21 2010''
 

Current revision

Structure of putative deoxyribonuclease TATDN1 isoform a

PDB ID 2xio

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2xio"
Personal tools