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3l7v

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{{Seed}}
 
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[[Image:3l7v.jpg|left|200px]]
 
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==Crystal structure of a hypothetical protein smu.1377c from Streptococcus mutans UA159==
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The line below this paragraph, containing "STRUCTURE_3l7v", creates the "Structure Box" on the page.
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<StructureSection load='3l7v' size='340' side='right' caption='[[3l7v]], [[Resolution|resolution]] 2.26&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3l7v]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Strmu Strmu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L7V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3L7V FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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-->
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3l7v| PDB=3l7v | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">smu.1377c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=210007 STRMU])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3l7v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l7v OCA], [http://pdbe.org/3l7v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3l7v RCSB], [http://www.ebi.ac.uk/pdbsum/3l7v PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3l7v ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l7/3l7v_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3l7v ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Members of the Sua5_YciO_YrdC protein family are found in both eukaryotes and prokaryotes and possess a conserved alpha/beta twisted open-sheet fold. The Escherichia coli protein YrdC has been shown to be involved in modification of tRNA. The crystal structure of smu.1377c, a hypothetical protein from Streptococcus mutans, has been determined to 2.25 A resolution. From structure analysis and comparison, it is shown that smu.1377c is a member of the Sua5_YciO_YrdC family and that it may play the same role as E. coli YrdC.
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===Crystal structure of a hypothetical protein smu.1377c from Streptococcus mutans UA159===
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The structure of the hypothetical protein smu.1377c from Streptococcus mutans suggests a role in tRNA modification.,Fu TM, Liu X, Li L, Su XD Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Jul 1;66(Pt, 7):771-5. Epub 2010 Jun 23. PMID:20606270<ref>PMID:20606270</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<!--
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_20606270}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3l7v" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 20606270 is the PubMed ID number.
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== References ==
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-->
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<references/>
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{{ABSTRACT_PUBMED_20606270}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Strmu]]
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3L7V is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_mutans Streptococcus mutans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L7V OCA].
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[[Category: Fu, T M]]
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[[Category: Liu, X]]
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==Reference==
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[[Category: Su, X D]]
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<ref group="xtra">PMID:20606270</ref><references group="xtra"/>
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[[Category: Streptococcus mutans]]
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[[Category: Fu, T M.]]
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[[Category: Liu, X.]]
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[[Category: Su, X D.]]
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[[Category: Smu 1377c]]
[[Category: Smu 1377c]]
[[Category: Transcription]]
[[Category: Transcription]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 21 10:17:23 2010''
 

Current revision

Crystal structure of a hypothetical protein smu.1377c from Streptococcus mutans UA159

3l7v, resolution 2.26Å

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