3n2d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:12, 6 November 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3n2d.jpg|left|200px]]
 
-
<!--
+
==Crystal Structure of the Complex of type I Ribosome inactivating protein with hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 2.2 A resolution==
-
The line below this paragraph, containing "STRUCTURE_3n2d", creates the "Structure Box" on the page.
+
<StructureSection load='3n2d' size='340' side='right'caption='[[3n2d]], [[Resolution|resolution]] 2.22&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3n2d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Momordica_balsamina Momordica balsamina] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N2D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3N2D FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.22&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
{{STRUCTURE_3n2d| PDB=3n2d | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3n2d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n2d OCA], [https://pdbe.org/3n2d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3n2d RCSB], [https://www.ebi.ac.uk/pdbsum/3n2d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3n2d ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/D9J2T9_MOMBA D9J2T9_MOMBA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n2/3n2d_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3n2d ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of the Complex of type I Ribosome inactivating protein with hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 2.2 A resolution===
+
==See Also==
-
 
+
*[[Ribosome inactivating protein 3D structures|Ribosome inactivating protein 3D structures]]
-
 
+
*[[Stathmin-4 3D structures|Stathmin-4 3D structures]]
-
==About this Structure==
+
__TOC__
-
3N2D is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Momordica_balsamina Momordica balsamina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N2D OCA].
+
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Momordica balsamina]]
[[Category: Momordica balsamina]]
-
[[Category: RRNA N-glycosylase]]
+
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Bhushan, A.]]
+
[[Category: Bhushan A]]
-
[[Category: Kaur, P.]]
+
[[Category: Kaur P]]
-
[[Category: Kumar, R Prem.]]
+
[[Category: Kushwaha GS]]
-
[[Category: Kushwaha, G S.]]
+
[[Category: Prem Kumar R]]
-
[[Category: Sharma, S.]]
+
[[Category: Sharma S]]
-
[[Category: Singh, T P.]]
+
[[Category: Singh TP]]
-
[[Category: Sinha, M.]]
+
[[Category: Sinha M]]
-
[[Category: Hexapeptide]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Plant protein]]
+
-
[[Category: Rip]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 28 12:40:15 2010''
+

Current revision

Crystal Structure of the Complex of type I Ribosome inactivating protein with hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 2.2 A resolution

PDB ID 3n2d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools