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3o2g
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3o2g is ON HOLD Authors: Krojer, T., Kochan, G., Pilka, E., Ugochukwu, E., Muniz, J., Filippakopoulos, P., von Delft, F., Bountra, C., Arrowsmith, C...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal Structure of Human gamma-butyrobetaine,2-oxoglutarate dioxygenase 1 (BBOX1)== | |
| + | <StructureSection load='3o2g' size='340' side='right'caption='[[3o2g]], [[Resolution|resolution]] 1.78Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3o2g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O2G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3O2G FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NM2:3-CARBOXY-N,N,N-TRIMETHYLPROPAN-1-AMINIUM'>NM2</scene>, <scene name='pdbligand=OGA:N-OXALYLGLYCINE'>OGA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3o2g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o2g OCA], [https://pdbe.org/3o2g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3o2g RCSB], [https://www.ebi.ac.uk/pdbsum/3o2g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3o2g ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/BODG_HUMAN BODG_HUMAN] Catalyzes the formation of L-carnitine from gamma-butyrobetaine. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o2/3o2g_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3o2g ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| - | + | *[[Dioxygenase 3D structures|Dioxygenase 3D structures]] | |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Homo sapiens]] | |
| + | [[Category: Large Structures]] | ||
| + | [[Category: Arrowsmith CH]] | ||
| + | [[Category: Bountra C]] | ||
| + | [[Category: Claridge TDW]] | ||
| + | [[Category: Edwards A]] | ||
| + | [[Category: Filippakopoulos P]] | ||
| + | [[Category: Henry L]] | ||
| + | [[Category: Kavanagh KL]] | ||
| + | [[Category: Kochan G]] | ||
| + | [[Category: Krojer T]] | ||
| + | [[Category: Leung IKH]] | ||
| + | [[Category: McDonough MA]] | ||
| + | [[Category: Muniz J]] | ||
| + | [[Category: Oppermann U]] | ||
| + | [[Category: Pilka E]] | ||
| + | [[Category: Schofield CJ]] | ||
| + | [[Category: Ugochukwu E]] | ||
| + | [[Category: Weigelt J]] | ||
| + | [[Category: Von Delft F]] | ||
Current revision
Crystal Structure of Human gamma-butyrobetaine,2-oxoglutarate dioxygenase 1 (BBOX1)
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Categories: Homo sapiens | Large Structures | Arrowsmith CH | Bountra C | Claridge TDW | Edwards A | Filippakopoulos P | Henry L | Kavanagh KL | Kochan G | Krojer T | Leung IKH | McDonough MA | Muniz J | Oppermann U | Pilka E | Schofield CJ | Ugochukwu E | Weigelt J | Von Delft F
