This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3isi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:57, 6 September 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3isi.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of Sco3058 with bound inhibitor L-Ala-L-Asp Phosphinodipeptide==
-
The line below this paragraph, containing "STRUCTURE_3isi", creates the "Structure Box" on the page.
+
<StructureSection load='3isi' size='340' side='right'caption='[[3isi]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3isi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ISI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ISI FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=B88:(2S)-2-{[(S)-[(1R)-1-AMINOETHYL](HYDROXY)PHOSPHORYL]METHYL}BUTANEDIOIC+ACID'>B88</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_3isi| PDB=3isi | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3isi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3isi OCA], [https://pdbe.org/3isi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3isi RCSB], [https://www.ebi.ac.uk/pdbsum/3isi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3isi ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of Sco3058 with bound inhibitor L-Ala-L-Asp Phosphinodipeptide===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q93J45_STRCO Q93J45_STRCO]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3ISI is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ISI OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/is/3isi_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3isi ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Streptomyces coelicolor]]
[[Category: Streptomyces coelicolor]]
-
[[Category: Nguyen, T T.]]
+
[[Category: Nguyen TT]]
-
[[Category: Hydrolase]]
+
-
[[Category: Tim-barrel]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 4 09:07:50 2010''
+

Current revision

Crystal structure of Sco3058 with bound inhibitor L-Ala-L-Asp Phosphinodipeptide

PDB ID 3isi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools