3jva
From Proteopedia
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| - | {{Seed}} | ||
| - | [[Image:3jva.jpg|left|200px]] | ||
| - | < | + | ==Crystal structure of Dipeptide Epimerase from Enterococcus faecalis V583== |
| - | + | <StructureSection load='3jva' size='340' side='right'caption='[[3jva]], [[Resolution|resolution]] 1.70Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3jva]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis_V583 Enterococcus faecalis V583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JVA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JVA FirstGlance]. <br> | |
| - | or | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> |
| - | --> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jva OCA], [https://pdbe.org/3jva PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jva RCSB], [https://www.ebi.ac.uk/pdbsum/3jva PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jva ProSAT]</span></td></tr> | |
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/HYEP_ENTFA HYEP_ENTFA] Catalyzes the epimerization of L-Ile-L-Tyr to L-Ile-D-Tyr (in vitro). Catalyzes the epimerization of dipeptides, with a preference for substrates with a hydrophobic or basic amino acid in the first position, followed by an aromatic residue in the second position. Has epimerase activity with L-Ile-L-Tyr, L-Val-L-Tyr and L-Arg-L-Tyr (in vitro).<ref>PMID:22392983</ref> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jv/3jva_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jva ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | == | + | ==See Also== |
| - | + | *[[Muconate cycloisomerase|Muconate cycloisomerase]] | |
| - | + | == References == | |
| - | == | + | <references/> |
| - | + | __TOC__ | |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: Almo | + | [[Category: Enterococcus faecalis V583]] |
| - | [[Category: Fedorov | + | [[Category: Large Structures]] |
| - | [[Category: Fedorov | + | [[Category: Almo SC]] |
| - | [[Category: Gerlt | + | [[Category: Fedorov AA]] |
| - | [[Category: Imker | + | [[Category: Fedorov EV]] |
| - | [[Category: Sakai | + | [[Category: Gerlt JA]] |
| - | + | [[Category: Imker H]] | |
| - | + | [[Category: Sakai A]] | |
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| - | + | ||
| - | + | ||
Current revision
Crystal structure of Dipeptide Epimerase from Enterococcus faecalis V583
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