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3mky

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{{Seed}}
 
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[[Image:3mky.png|left|200px]]
 
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==Structure of SopB(155-323)-18mer DNA complex, I23 form==
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The line below this paragraph, containing "STRUCTURE_3mky", creates the "Structure Box" on the page.
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<StructureSection load='3mky' size='340' side='right'caption='[[3mky]], [[Resolution|resolution]] 2.86&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3mky]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MKY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MKY FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.86&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_3mky| PDB=3mky | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mky FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mky OCA], [https://pdbe.org/3mky PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mky RCSB], [https://www.ebi.ac.uk/pdbsum/3mky PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mky ProSAT]</span></td></tr>
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</table>
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===Structure of SopB(155-323)-18mer DNA complex, I23 form===
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== Function ==
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[https://www.uniprot.org/uniprot/SOPB_ECOLI SOPB_ECOLI] Control of plasmid partitioning; required to recognize the cis-acting. Binds specifically with the DNA segment containing the sopC region. SopB is trans-acting.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_20236989}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 20236989 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mk/3mky_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_20236989}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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3MKY is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MKY OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mky ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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<ref group="xtra">PMID:20236989</ref><references group="xtra"/>
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</StructureSection>
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[[Category: Escherichia coli]]
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[[Category: Escherichia coli K-12]]
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[[Category: Piro, K.]]
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[[Category: Large Structures]]
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[[Category: Schumacher, M A.]]
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[[Category: Piro K]]
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[[Category: Xu, W.]]
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[[Category: Schumacher MA]]
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[[Category: Centromere]]
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[[Category: Xu W]]
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[[Category: Dna binding protein-dna complex]]
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[[Category: F plasmid]]
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[[Category: Partition]]
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[[Category: Sopb]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Aug 12 00:11:35 2010''
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Current revision

Structure of SopB(155-323)-18mer DNA complex, I23 form

PDB ID 3mky

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