3mmh

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{{Seed}}
 
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[[Image:3mmh.png|left|200px]]
 
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==X-ray structure of free methionine-R-sulfoxide reductase from neisseria meningitidis in complex with its substrate==
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The line below this paragraph, containing "STRUCTURE_3mmh", creates the "Structure Box" on the page.
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<StructureSection load='3mmh' size='340' side='right'caption='[[3mmh]], [[Resolution|resolution]] 1.25&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3mmh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_8013 Neisseria meningitidis 8013]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MMH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MMH FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.25&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=SME:METHIONINE+SULFOXIDE'>SME</scene></td></tr>
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{{STRUCTURE_3mmh| PDB=3mmh | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mmh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mmh OCA], [https://pdbe.org/3mmh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mmh RCSB], [https://www.ebi.ac.uk/pdbsum/3mmh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mmh ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mm/3mmh_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mmh ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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A new family of methionine-sulfoxide reductase (Msr) was recently described. The enzyme, named fRMsr, selectively reduces the R isomer at the sulfoxide function of free methionine sulfoxide (Met-R-O). The fRMsrs belong to the GAF fold family. They represent the first GAF domain to show enzymatic activity. Two other Msr families, MsrA and MsrB, were already known. MsrA and MsrB reduce free Met-S-O and Met-R-O, respectively, but exhibit higher catalytic efficiency toward Met-O within a peptide or a protein context. The fold of the three families differs. In the present work, the crystal structure of the fRMsr from Neisseria meningitidis has been determined in complex with S-Met-R-O. Based on biochemical and kinetic data as well as genomic analyses, Cys(118) is demonstrated to be the catalytic Cys on which a sulfenic acid is formed. All of the structural factors involved in the stereoselectivity of the l-Met-R-O binding were identified and account for why Met-S-O, DMSO, and a Met-O within a peptide are not substrates. Taking into account the structural, enzymatic, and biochemical information, a scenario of the catalysis for the reductase step is proposed. Based on the thiol content before and after Met-O reduction and the stoichiometry of Met formed per subunit of wild type and Cys-to-Ala mutants, a scenario of the recycling process of the N. meningitidis fRMsr is proposed. All of the biochemical, enzymatic, and structural properties of the N. meningitidis fRMsr are compared with those of MsrA and MsrB and are discussed in terms of the evolution of function of the GAF domain.
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===X-ray structure of free methionine-R-sulfoxide reductase from neisseria meningitidis in complex with its substrate===
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Structural and biochemical characterization of free methionine-R-sulfoxide reductase from Neisseria meningitidis.,Gruez A, Libiad M, Boschi-Muller S, Branlant G J Biol Chem. 2010 Aug 6;285(32):25033-43. Epub 2010 May 19. PMID:20489204<ref>PMID:20489204</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_20489204}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3mmh" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 20489204 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_20489204}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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3MMH is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MMH OCA].
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[[Category: Neisseria meningitidis 8013]]
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[[Category: Boschi-Muller S]]
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==Reference==
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[[Category: Branlant G]]
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<ref group="xtra">PMID:20489204</ref><references group="xtra"/>
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[[Category: Gruez A]]
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[[Category: Neisseria meningitidis]]
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[[Category: Libiad M]]
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[[Category: Boschi-Muller, S.]]
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[[Category: Branlant, G.]]
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[[Category: Gruez, A.]]
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[[Category: Libiad, M.]]
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[[Category: Oxidoreductase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 18 11:07:58 2010''
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Current revision

X-ray structure of free methionine-R-sulfoxide reductase from neisseria meningitidis in complex with its substrate

PDB ID 3mmh

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