This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3oqj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 3oqj is ON HOLD Authors: Bonnefond, L. Description: Crystal structure of Belic with CAPSO ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on...)
Current revision (11:18, 21 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3oqj is ON HOLD
+
==Crystal structure of B. licheniformis CDPS yvmC-BLIC in complex with CAPSO==
-
 
+
<StructureSection load='3oqj' size='340' side='right'caption='[[3oqj]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
Authors: Bonnefond, L.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3oqj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_licheniformis_DSM_13_=_ATCC_14580 Bacillus licheniformis DSM 13 = ATCC 14580]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OQJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OQJ FirstGlance]. <br>
-
Description: Crystal structure of Belic with CAPSO
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.399&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3CX:(2S)-3-(CYCLOHEXYLAMINO)-2-HYDROXYPROPANE-1-SULFONIC+ACID'>3CX</scene></td></tr>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 15 10:38:45 2010''
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oqj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oqj OCA], [https://pdbe.org/3oqj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oqj RCSB], [https://www.ebi.ac.uk/pdbsum/3oqj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oqj ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CDLS_BACLD CDLS_BACLD] Involved in the biosynthesis of pulcherrimin, a red extracellular pigment. It uses activated amino acids in the form of aminoacyl-tRNAs (aa-tRNAs) as substrates to catalyze the ATP-independent formation of cyclodipeptides which are intermediates in diketopiperazine (DKP) biosynthetic pathways. Catalyzes the formation of cyclo(L-Leu-L-Leu) (cLL) from L-leucyl-tRNA(Leu). Can also incorporate various nonpolar residues, such as L-phenylalanine, L-leucine and methionine, into cyclodipeptides.<ref>PMID:19430487</ref> <ref>PMID:21325056</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bacillus licheniformis DSM 13 = ATCC 14580]]
 +
[[Category: Large Structures]]
 +
[[Category: Arai T]]
 +
[[Category: Bonnefond L]]
 +
[[Category: Ishitani R]]
 +
[[Category: Nureki O]]
 +
[[Category: Suzuki T]]

Current revision

Crystal structure of B. licheniformis CDPS yvmC-BLIC in complex with CAPSO

PDB ID 3oqj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools