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2uwx

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[[Image:2uwx.gif|left|200px]]<br />
 
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<applet load="2uwx" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="2uwx, resolution 2.39&Aring;" />
 
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'''ACTIVE SITE RESTRUCTURING REGULATES LIGAND RECOGNITION IN CLASS A PENICILLIN-BINDING PROTEINS'''<br />
 
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==About this Structure==
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==Active site restructuring regulates ligand recognition in class A penicillin-binding proteins==
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2UWX is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]] with SO4, CL and EDO as [[http://en.wikipedia.org/wiki/ligands ligands]]. This structure superseeds the now removed PDB entry 2BG3. Structure known Active Site: AC1. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2UWX OCA]].
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<StructureSection load='2uwx' size='340' side='right'caption='[[2uwx]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
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[[Category: Single protein]]
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== Structural highlights ==
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[[Category: Streptococcus pneumoniae]]
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<table><tr><td colspan='2'>[[2uwx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_R6 Streptococcus pneumoniae R6]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2bg3 2bg3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UWX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2UWX FirstGlance]. <br>
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[[Category: Dessen, A.]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.39&#8491;</td></tr>
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[[Category: Dideberg, O.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NC1:NITROCEFIN+ACYL-SERINE'>NC1</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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[[Category: Diguilmi, A.M.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2uwx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uwx OCA], [https://pdbe.org/2uwx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2uwx RCSB], [https://www.ebi.ac.uk/pdbsum/2uwx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2uwx ProSAT]</span></td></tr>
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[[Category: Job, V.]]
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</table>
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[[Category: Macheboeuf, P.]]
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== Function ==
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[[Category: Vernet, T.]]
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[https://www.uniprot.org/uniprot/Q7CRA4_STRR6 Q7CRA4_STRR6]
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[[Category: CL]]
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== Evolutionary Conservation ==
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[[Category: EDO]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: SO4]]
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Check<jmol>
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[[Category: acyltransferase]]
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<jmolCheckbox>
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[[Category: cell wall]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uw/2uwx_consurf.spt"</scriptWhenChecked>
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[[Category: glycosyltransferase]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: peptidoglycan]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: peptidoglycan synthesis multifunctional enzyme]]
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</jmolCheckbox>
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[[Category: transferase]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2uwx ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Bacterial cell division is a complex, multimolecular process that requires biosynthesis of new peptidoglycan by penicillin-binding proteins (PBPs) during cell wall elongation and septum formation steps. Streptococcus pneumoniae has three bifunctional (class A) PBPs that catalyze both polymerization of glycan chains (glycosyltransfer) and cross-linking of pentapeptidic bridges (transpeptidation) during the peptidoglycan biosynthetic process. In addition to playing important roles in cell division, PBPs are also the targets for beta-lactam antibiotics and thus play key roles in drug-resistance mechanisms. The crystal structure of a soluble form of pneumococcal PBP1b (PBP1b*) has been solved to 1.9 A, thus providing previously undescribed structural information regarding a class A PBP from any organism. PBP1b* is a three-domain molecule harboring a short peptide from the glycosyltransferase domain bound to an interdomain linker region, the transpeptidase domain, and a C-terminal region. The structure of PBP1b* complexed with beta-lactam antibiotics reveals that ligand recognition requires a conformational modification involving conserved elements within the cleft. The open and closed structures of PBP1b* suggest how class A PBPs may become activated as novel peptidoglycan synthesis becomes necessary during the cell division process. In addition, this structure provides an initial framework for the understanding of the role of class A PBPs in the development of antibiotic resistance.
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Oct 30 10:58:40 2007''
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Active site restructuring regulates ligand recognition in class A penicillin-binding proteins.,Macheboeuf P, Di Guilmi AM, Job V, Vernet T, Dideberg O, Dessen A Proc Natl Acad Sci U S A. 2005 Jan 18;102(3):577-82. Epub 2005 Jan 6. PMID:15637155<ref>PMID:15637155</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 2uwx" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Penicillin-binding protein 3D structures|Penicillin-binding protein 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Streptococcus pneumoniae R6]]
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[[Category: Dessen A]]
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[[Category: DiGuilmi AM]]
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[[Category: Dideberg O]]
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[[Category: Job V]]
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[[Category: Macheboeuf P]]
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[[Category: Vernet T]]

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Active site restructuring regulates ligand recognition in class A penicillin-binding proteins

PDB ID 2uwx

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