2kt3

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{{Seed}}
 
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[[Image:2kt3.jpg|left|200px]]
 
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==Structure of Hg-NmerA, Hg(II) complex of the N-terminal domain of Tn501 Mercuric Reductase==
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The line below this paragraph, containing "STRUCTURE_2kt3", creates the "Structure Box" on the page.
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<StructureSection load='2kt3' size='340' side='right'caption='[[2kt3]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2kt3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KT3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KT3 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene></td></tr>
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{{STRUCTURE_2kt3| PDB=2kt3 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kt3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kt3 OCA], [https://pdbe.org/2kt3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kt3 RCSB], [https://www.ebi.ac.uk/pdbsum/2kt3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kt3 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MERA_PSEAI MERA_PSEAI] Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kt/2kt3_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kt3 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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To avoid nonspecific and/or undesirable binding and reactivity of metal ions with cellular components, organisms have evolved metal-specific systems of trafficking proteins. Although systems differ, those handling soft metal ions such as Hg2+, Cu1+, Zn2+, etc., all utilize heavy metal associated (HMA) proteins and domains of ca. 70 amino acids with a conserved GMXCXXC motif in a betaalphabetabetaalphabeta structural fold. While the conserved cysteines define a common metal binding site in these proteins, other structural features must be utilized to create metal ion, protein partner and contextual specificities. This paper presents initial structure/function studies of the N-terminal HMA domain (NmerA) of Tn501 mercuric ion reductase (MerA) aimed at identifying structural features critical to its role in facilitating efficient transfer of Hg2+ to the MerA catalytic core for reductive detoxification. First, NMR solution structures of reduced and Hg2+-bound forms of NmerA are presented that allow definition and comparison of the structure of the metal binding loop in the two states. Structural differences between the two forms are compared with differences observed in three HMA domains with different metal ion and functional contexts. Second, analyses of the UV absorbance properties of wild type, Cys11Ala and Cys14Ala forms of NmerA are presented that provide assignment of the pKa values for the two cysteine thiols of the metal binding motif. Third, results from 13C-NMR studies of wild type and Y62F NmerA labeled with beta-13C-cysteine are presented that define a role for Tyr62 in modulating the pKa values of the cysteine thiols.
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===Structure of Hg-NmerA, Hg(II) complex of the N-terminal domain of Tn501 Mercuric Reductase===
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NmerA of Tn501 Mercuric Ion Reductase: Structural Modulation of the pKa Values of the Metal Binding Cysteine Thiols.,Ledwidge R, Hong B, Doetsch V, Miller SM Biochemistry. 2010 Sep 9. PMID:20828160<ref>PMID:20828160</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_20828160}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2kt3" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 20828160 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_20828160}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2KT3 is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KT3 OCA].
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==Reference==
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<ref group="xtra">PMID:20828160</ref><references group="xtra"/>
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[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
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[[Category: Danacea, F.]]
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[[Category: Danacea F]]
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[[Category: Dotsch, V.]]
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[[Category: Dotsch V]]
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[[Category: Ledwidge, R.]]
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[[Category: Ledwidge R]]
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[[Category: Miller, S M.]]
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[[Category: Miller SM]]
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[[Category: Hma domain]]
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[[Category: Mera]]
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[[Category: Mercuric reductase]]
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[[Category: Mercuric resistance]]
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[[Category: Mercury]]
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[[Category: Metal-binding]]
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[[Category: Nmera]]
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[[Category: Oxidoreductase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 22 14:41:29 2010''
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Current revision

Structure of Hg-NmerA, Hg(II) complex of the N-terminal domain of Tn501 Mercuric Reductase

PDB ID 2kt3

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