3n89

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:28, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3n89.jpg|left|200px]]
 
-
<!--
+
==KH domains==
-
The line below this paragraph, containing "STRUCTURE_3n89", creates the "Structure Box" on the page.
+
<StructureSection load='3n89' size='340' side='right'caption='[[3n89]], [[Resolution|resolution]] 2.79&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3n89]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N89 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3N89 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.789&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3n89 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n89 OCA], [https://pdbe.org/3n89 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3n89 RCSB], [https://www.ebi.ac.uk/pdbsum/3n89 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3n89 ProSAT]</span></td></tr>
-
{{STRUCTURE_3n89| PDB=3n89 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===KH domains===
+
[https://www.uniprot.org/uniprot/GLD3_CAEEL GLD3_CAEEL] Required maternally for germline survival and embryogenesis. Forms a complex with gls-1 which promotes the oogenic cell fate by freeing the translational repressor fbf to repress sperm promoting factors. Promotes maturation of primary spermatocytes to mature sperm. Required during hermaphrodite development to promote sperm fate, which is critical for determining the normal number of sperm. Promotion of sperm fate is at the expense of oogenesis, possibly through the negative regulation of fbf. Required during male development for the continued production of sperm and inhibition of oogenesis. Together with gld-2, promotes the transition from mitosis to meiosis.<ref>PMID:12431376</ref> <ref>PMID:15454534</ref> <ref>PMID:19461891</ref>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_20823118}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 20823118 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n8/3n89_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_20823118}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3n89 ConSurf].
-
3N89 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N89 OCA].
+
<div style="clear:both"></div>
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:20823118</ref><references group="xtra"/>
+
__TOC__
 +
</StructureSection>
[[Category: Caenorhabditis elegans]]
[[Category: Caenorhabditis elegans]]
-
[[Category: Bonneau, F.]]
+
[[Category: Large Structures]]
-
[[Category: Conti, E.]]
+
[[Category: Bonneau F]]
-
[[Category: Eckmann, C R.]]
+
[[Category: Conti E]]
-
[[Category: Hartung, S A.]]
+
[[Category: Eckmann CR]]
-
[[Category: Nakel, K.]]
+
[[Category: Hartung SA]]
-
[[Category: Cell cycle]]
+
[[Category: Nakel K]]
-
[[Category: Germline development]]
+
-
[[Category: Kh domain]]
+
-
[[Category: Rna binding]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 22 14:46:59 2010''
+

Current revision

KH domains

PDB ID 3n89

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools