3on3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:36, 27 November 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3on3.jpg|left|200px]]
 
-
<!--
+
==The crystal structure of keto/oxoacid ferredoxin oxidoreductase, gamma subunit from Geobacter sulfurreducens PCA==
-
The line below this paragraph, containing "STRUCTURE_3on3", creates the "Structure Box" on the page.
+
<StructureSection load='3on3' size='340' side='right'caption='[[3on3]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3on3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacter_sulfurreducens_PCA Geobacter sulfurreducens PCA]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ON3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ON3 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.193&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3on3| PDB=3on3 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3on3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3on3 OCA], [https://pdbe.org/3on3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3on3 RCSB], [https://www.ebi.ac.uk/pdbsum/3on3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3on3 ProSAT]</span></td></tr>
-
 
+
</table>
-
===The crystal structure of keto/oxoacid ferredoxin oxidoreductase, gamma subunit from Geobacter sulfurreducens PCA===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q74D49_GEOSL Q74D49_GEOSL]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3ON3 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Geobacter_sulfurreducens Geobacter sulfurreducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ON3 OCA].
+
Check<jmol>
-
[[Category: Geobacter sulfurreducens]]
+
<jmolCheckbox>
-
[[Category: Buck, K.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/on/3on3_consurf.spt"</scriptWhenChecked>
-
[[Category: Hatzos, C.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Joachimiak, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmolCheckbox>
-
[[Category: Tan, K.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3on3 ConSurf].
-
[[Category: Zhang, R.]]
+
<div style="clear:both"></div>
-
[[Category: Mcsg]]
+
__TOC__
-
[[Category: Midwest center for structural genomic]]
+
</StructureSection>
-
[[Category: Oxidoreductase]]
+
[[Category: Geobacter sulfurreducens PCA]]
-
[[Category: Protein structure initiative]]
+
[[Category: Large Structures]]
-
[[Category: Psi-2]]
+
[[Category: Buck K]]
-
[[Category: Structural genomic]]
+
[[Category: Hatzos C]]
-
 
+
[[Category: Joachimiak A]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 22 14:49:53 2010''
+
[[Category: Tan K]]
 +
[[Category: Zhang R]]

Current revision

The crystal structure of keto/oxoacid ferredoxin oxidoreductase, gamma subunit from Geobacter sulfurreducens PCA

PDB ID 3on3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools