This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2kj3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:46, 1 May 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2kj3.png|left|200px]]
 
-
<!--
+
==High-resolution structure of the HET-s(218-289) prion in its amyloid form obtained by solid-state NMR==
-
The line below this paragraph, containing "STRUCTURE_2kj3", creates the "Structure Box" on the page.
+
<StructureSection load='2kj3' size='340' side='right'caption='[[2kj3]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2kj3]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Podospora_anserina Podospora anserina]. The September 2015 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Amyloids'' by David Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2015_9 10.2210/rcsb_pdb/mom_2015_9]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KJ3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KJ3 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solid-state NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kj3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kj3 OCA], [https://pdbe.org/2kj3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kj3 RCSB], [https://www.ebi.ac.uk/pdbsum/2kj3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kj3 ProSAT]</span></td></tr>
-
{{STRUCTURE_2kj3| PDB=2kj3 | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/HETS_PODAS HETS_PODAS] Responsible for heterokaryon incompatibility, a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait [het-s]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.<ref>PMID:1886611</ref> <ref>PMID:8224826</ref> <ref>PMID:9275200</ref>
-
===High-resolution structure of the HET-s(218-289) prion in its amyloid form obtained by solid-state NMR===
+
==See Also==
-
 
+
*[[Prion 3D structures|Prion 3D structures]]
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_20828131}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 20828131 is the PubMed ID number.
+
</StructureSection>
-
-->
+
[[Category: Amyloids]]
-
{{ABSTRACT_PUBMED_20828131}}
+
[[Category: Large Structures]]
-
 
+
-
==About this Structure==
+
-
2KJ3 is a 3 chains structure with sequences from [http://en.wikipedia.org/wiki/Podospora_anserina Podospora anserina]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KJ3 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:20828131</ref><ref group="xtra">PMID:18339938</ref><ref group="xtra">PMID:19504509</ref><references group="xtra"/>
+
[[Category: Podospora anserina]]
[[Category: Podospora anserina]]
-
[[Category: Ab, E.]]
+
[[Category: RCSB PDB Molecule of the Month]]
-
[[Category: Lange, A.]]
+
[[Category: AB E]]
-
[[Category: Loquet, A.]]
+
[[Category: Lange A]]
-
[[Category: Meier, B H.]]
+
[[Category: Loquet A]]
-
[[Category: Melckebeke, H Van.]]
+
[[Category: Meier BH]]
-
[[Category: Wasmer, C.]]
+
[[Category: Van Melckebeke H]]
-
[[Category: Amyloid fibril]]
+
[[Category: Wasmer C]]
-
[[Category: Asparagine ladder]]
+
-
[[Category: Beta-helix]]
+
-
[[Category: Beta-solenoid]]
+
-
[[Category: Hydrophobic core]]
+
-
[[Category: Parallel beta-sheet]]
+
-
[[Category: Prion]]
+
-
[[Category: Protein fibril]]
+
-
[[Category: Salt bridge]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 29 07:48:15 2010''
+

Current revision

High-resolution structure of the HET-s(218-289) prion in its amyloid form obtained by solid-state NMR

PDB ID 2kj3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools