3bfp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="3bfp" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bfp, resolution 1.750&Aring;" /> '''Crystal Structure o...)
Current revision (09:28, 21 February 2024) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3bfp.jpg|left|200px]]<br /><applet load="3bfp" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="3bfp, resolution 1.750&Aring;" />
 
-
'''Crystal Structure of apo-PglD from Campylobacter jejuni'''<br />
 
-
==About this Structure==
+
==Crystal Structure of apo-PglD from Campylobacter jejuni==
-
3BFP is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni] with <scene name='pdbligand=FLC:'>FLC</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Known structural/functional Site: <scene name='pdbsite=AC1:Flc Binding Site For Residue A 1'>AC1</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BFP OCA].
+
<StructureSection load='3bfp' size='340' side='right'caption='[[3bfp]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3bfp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BFP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BFP FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bfp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bfp OCA], [https://pdbe.org/3bfp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bfp RCSB], [https://www.ebi.ac.uk/pdbsum/3bfp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bfp ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PGLD_CAMJE PGLD_CAMJE] Acetyltransferase that modifies the UDP-4-amino-sugar to form UDP-N,N'-diacetylbacillosamine in the N-linked protein glycosylation pathway.<ref>PMID:17087520</ref> <ref>PMID:19448740</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bf/3bfp_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bfp ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Campylobacter jejuni]]
[[Category: Campylobacter jejuni]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: BSGI, Montreal-Kingston.Bacterial.Structural.Genomics.Initiative.]]
+
[[Category: Cygler M]]
-
[[Category: Cygler, M.]]
+
[[Category: Leclerc S]]
-
[[Category: Leclerc, S.]]
+
[[Category: Matte A]]
-
[[Category: Matte, A.]]
+
[[Category: Proteau A]]
-
[[Category: Proteau, A.]]
+
[[Category: Rangarajan ES]]
-
[[Category: Rangarajan, E.S.]]
+
[[Category: Watson DC]]
-
[[Category: Watson, D.C.]]
+
[[Category: Young NM]]
-
[[Category: Young, N.M.]]
+
-
[[Category: FLC]]
+
-
[[Category: bacillosamine]]
+
-
[[Category: bsgi]]
+
-
[[Category: coa binding protein]]
+
-
[[Category: left-handed beta helix]]
+
-
[[Category: mkbsgi]]
+
-
[[Category: montreal-kingston bacterial structural genomics initiative]]
+
-
[[Category: n-acetyltransferase]]
+
-
[[Category: n-glycan biosynthesis]]
+
-
[[Category: structural genomics]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 10:59:30 2008''
+

Current revision

Crystal Structure of apo-PglD from Campylobacter jejuni

PDB ID 3bfp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3bfp"
Personal tools