3bww

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="3bww" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bww, resolution 2.200&Aring;" /> '''Crystal structure o...)
Current revision (01:39, 21 November 2024) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3bww.jpg|left|200px]]<br /><applet load="3bww" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="3bww, resolution 2.200&Aring;" />
 
-
'''Crystal structure of protein of unknown function (DUF692/COG3220) (YP_719350.1) from Haemophilus somnus 129PT at 2.20 A resolution'''<br />
 
-
==About this Structure==
+
==Crystal structure of a duf692 family protein (hs_1138) from haemophilus somnus 129pt at 2.20 A resolution==
-
3BWW is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Haemophilus_somnus_129pt Haemophilus somnus 129pt] with <scene name='pdbligand=FE:'>FE</scene>, <scene name='pdbligand=CAC:'>CAC</scene> and <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BWW OCA].
+
<StructureSection load='3bww' size='340' side='right'caption='[[3bww]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
[[Category: Haemophilus somnus 129pt]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[3bww]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Histophilus_somni_129PT Histophilus somni 129PT]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BWW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BWW FirstGlance]. <br>
-
[[Category: JCSG, Joint.Center.for.Structural.Genomics.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
[[Category: CAC]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: EDO]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bww FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bww OCA], [https://pdbe.org/3bww PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bww RCSB], [https://www.ebi.ac.uk/pdbsum/3bww PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bww ProSAT], [https://www.topsan.org/Proteins/JCSG/3bww TOPSAN]</span></td></tr>
-
[[Category: FE]]
+
</table>
-
[[Category: jcsg]]
+
== Function ==
-
[[Category: joint center for structural genomics]]
+
[https://www.uniprot.org/uniprot/Q0I408_HISS1 Q0I408_HISS1]
-
[[Category: protein of unknown function (duf692/cog3220)]]
+
== Evolutionary Conservation ==
-
[[Category: protein structure initiative]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: psi-2]]
+
Check<jmol>
-
[[Category: structural genomics]]
+
<jmolCheckbox>
-
[[Category: unknown function]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bw/3bww_consurf.spt"</scriptWhenChecked>
-
[[Category: yp_719350.1]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 11:01:05 2008''
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bww ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Histophilus somni 129PT]]
 +
[[Category: Large Structures]]

Current revision

Crystal structure of a duf692 family protein (hs_1138) from haemophilus somnus 129pt at 2.20 A resolution

PDB ID 3bww

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools