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3ocm

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{{Seed}}
 
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[[Image:3ocm.jpg|left|200px]]
 
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==The crystal structure of a domain from a possible membrane protein of Bordetella parapertussis==
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The line below this paragraph, containing "STRUCTURE_3ocm", creates the "Structure Box" on the page.
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<StructureSection load='3ocm' size='340' side='right' caption='[[3ocm]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3ocm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"acinetobacter_parapertussis"_(eldering_and_kendrick_1938)_steel_and_cowan_1964 "acinetobacter parapertussis" (eldering and kendrick 1938) steel and cowan 1964]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OCM FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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-->
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3ocm| PDB=3ocm | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BPP2278 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=519 "Acinetobacter parapertussis" (Eldering and Kendrick 1938) Steel and Cowan 1964])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ocm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ocm OCA], [http://pdbe.org/3ocm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ocm RCSB], [http://www.ebi.ac.uk/pdbsum/3ocm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ocm ProSAT]</span></td></tr>
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===The crystal structure of a domain from a possible membrane protein of Bordetella parapertussis===
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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3OCM is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Bordetella_parapertussis Bordetella parapertussis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCM OCA].
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<jmolCheckbox>
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[[Category: Bordetella parapertussis]]
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oc/3ocm_consurf.spt"</scriptWhenChecked>
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[[Category: Cobb, G.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Joachimiak, A.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: MCSG, Midwest Center for Structural Genomics.]]
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</jmolCheckbox>
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[[Category: Tan, K.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ocm ConSurf].
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[[Category: Tesar, C.]]
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Cobb, G]]
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[[Category: Joachimiak, A]]
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[[Category: Structural genomic]]
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[[Category: Tan, K]]
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[[Category: Tesar, C]]
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Membrane protein]]
[[Category: Membrane protein]]
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[[Category: Midwest center for structural genomic]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 6 06:08:10 2010''
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Current revision

The crystal structure of a domain from a possible membrane protein of Bordetella parapertussis

3ocm, resolution 1.80Å

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