3mpl

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{{Seed}}
 
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[[Image:3mpl.png|left|200px]]
 
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==Crystal Structure of Bordetella pertussis BvgS VFT2 domain (Double Mutant F375E/Q461E)==
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The line below this paragraph, containing "STRUCTURE_3mpl", creates the "Structure Box" on the page.
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<StructureSection load='3mpl' size='340' side='right'caption='[[3mpl]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3mpl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bordetella_pertussis_Tohama_I Bordetella pertussis Tohama I]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MPL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MPL FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
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{{STRUCTURE_3mpl| PDB=3mpl | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mpl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mpl OCA], [https://pdbe.org/3mpl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mpl RCSB], [https://www.ebi.ac.uk/pdbsum/3mpl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mpl ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/BVGS_BORPE BVGS_BORPE] Member of the two-component regulatory system BvgS/BvgA. Phosphorylates BvgA via a four-step phosphorelay in response to environmental signals.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mp/3mpl_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mpl ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Two-component sensory transduction systems control important bacterial programs. In Bordetella pertussis, expression of the virulence regulon is controlled by the unorthodox BvgAS two-component system. BvgS is the prototype of a family of sensor-kinases that harbor periplasmic domains homologous to bacterial solute-binding proteins. Although BvgAS is active under laboratory conditions, no activating signal has been identified, only negative modulators. Here we show that the second periplasmic domain of BvgS interacts with modulators and adopts a Venus flytrap (VFT) fold. X-ray crystallography reveals that the two lobes of VFT2 delimitate a ligand-binding cavity enclosing fortuitous ligands. Most substitutions of putative ligand-binding residues in the VFT2 cavity keep BvgS active, and alteration of the cavity's electrostatic potential affects responsiveness to modulation. The crystal structure of this VFT2 variant conferring constitutive kinase activity to BvgS shows a closed cavity with another nonspecific ligand. Thus, VFT2 is closed and active without a specific agonist ligand, in contrast to typical VFTs. Modulators are antagonists of VFT2 that interrupt signaling. BvgAS is active for most of the B. pertussis infectious cycle, consistent with the proposed mechanism.
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===Crystal Structure of Bordetella pertussis BvgS VFT2 domain (Double Mutant F375E/Q461E)===
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Periplasmic domain of the sensor-kinase BvgS reveals a new paradigm for the Venus flytrap mechanism.,Herrou J, Bompard C, Wintjens R, Dupre E, Willery E, Villeret V, Locht C, Antoine R, Jacob-Dubuisson F Proc Natl Acad Sci U S A. 2010 Sep 20. PMID:20855615<ref>PMID:20855615</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_20855615}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3mpl" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 20855615 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_20855615}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Bordetella pertussis Tohama I]]
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3MPL is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bordetella_pertussis Bordetella pertussis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MPL OCA].
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[[Category: Large Structures]]
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[[Category: Antoine R]]
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==Reference==
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[[Category: Bompard C]]
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<ref group="xtra">PMID:20855615</ref><references group="xtra"/>
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[[Category: Dupre E]]
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[[Category: Bordetella pertussis]]
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[[Category: Herrou J]]
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[[Category: Antoine, R.]]
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[[Category: Jacob-Dubuisson F]]
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[[Category: Bompard, C.]]
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[[Category: Locht C]]
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[[Category: Dupre, E.]]
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[[Category: Villeret V]]
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[[Category: Herrou, J.]]
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[[Category: Willery E]]
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[[Category: Jacob-Dubuisson, F.]]
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[[Category: Wintjens R]]
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[[Category: Locht, C.]]
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[[Category: Villeret, V.]]
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[[Category: Willery, E.]]
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[[Category: Wintjens, R.]]
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[[Category: Sensor domain]]
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[[Category: Signaling protein]]
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[[Category: Venus flytrap]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 20 06:11:51 2010''
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Current revision

Crystal Structure of Bordetella pertussis BvgS VFT2 domain (Double Mutant F375E/Q461E)

PDB ID 3mpl

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