3nqx

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{{Seed}}
 
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[[Image:3nqx.png|left|200px]]
 
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==Crystal structure of vibriolysin MCP-02 mature enzyme, a zinc metalloprotease from M4 family==
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The line below this paragraph, containing "STRUCTURE_3nqx", creates the "Structure Box" on the page.
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<StructureSection load='3nqx' size='340' side='right'caption='[[3nqx]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3nqx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudoalteromonas_sp._SM9913 Pseudoalteromonas sp. SM9913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NQX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NQX FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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{{STRUCTURE_3nqx| PDB=3nqx | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nqx OCA], [https://pdbe.org/3nqx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nqx RCSB], [https://www.ebi.ac.uk/pdbsum/3nqx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nqx ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A1DRD5_PSEU9 A1DRD5_PSEU9]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nq/3nqx_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nqx ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Thermolysin-like proteases (TLPs), a large group of zinc metalloproteases, are synthesized as inactive precursors. TLPs with a long propeptide ( approximately 200 residues) undergo maturation following autoprocessing through an elusive molecular mechanism. We report the first two crystal structures for the autoprocessed complexes of a typical TLP, MCP-02. In the autoprocessed complex, Ala205 shifts upward by 33 A from the previously covalently linked residue, His204, indicating that, following autocleavage of the peptide bond between His204 and Ala205, a large conformational change from the zymogen to the autoprocessed complex occurs. The eight N-terminal residues (residues Ala205-Gly212) of the catalytic domain form a new beta-strand, nestling into two other beta-strands. Simultaneously, the apparent T(m) of the autoprocessed complex increases 20 degrees C compared to that of the zymogen. The stepwise degradation of the propeptide begins with two sequential cuttings at Ser49-Val50 and Gly57-Leu58, which lead to the disassembly of the propeptide and the formation of mature MCP-02. Our findings give new insights into the molecular mechanism of TLP maturation.
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===Crystal structure of vibriolysin MCP-02 mature enzyme, a zinc metalloprotease from M4 family===
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Structural basis for the autoprocessing of zinc metalloproteases in the thermolysin family.,Gao X, Wang J, Yu DQ, Bian F, Xie BB, Chen XL, Zhou BC, Lai LH, Wang ZX, Wu JW, Zhang YZ Proc Natl Acad Sci U S A. 2010 Oct 12;107(41):17569-74. Epub 2010 Sep 27. PMID:20876133<ref>PMID:20876133</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_20876133}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3nqx" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 20876133 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_20876133}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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3NQX is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudoalteromonas_sp. Pseudoalteromonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NQX OCA].
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[[Category: Pseudoalteromonas sp. SM9913]]
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[[Category: Gao X]]
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==Reference==
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[[Category: Wang J]]
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<ref group="xtra">PMID:20876133</ref><references group="xtra"/>
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[[Category: Wu J-W]]
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[[Category: Pseudoalteromonas sp.]]
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[[Category: Zhang Y-Z]]
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[[Category: Vibriolysin]]
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[[Category: Gao, X.]]
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[[Category: Wang, J.]]
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[[Category: Wu, J W.]]
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[[Category: Zhang, Y Z.]]
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[[Category: Alpha/beta protein]]
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[[Category: Hydrolase]]
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[[Category: Zinc metalloprotease]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 27 11:36:27 2010''
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Current revision

Crystal structure of vibriolysin MCP-02 mature enzyme, a zinc metalloprotease from M4 family

PDB ID 3nqx

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