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Sandbox 45

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Current revision (00:21, 16 October 2012) (edit) (undo)
 
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<applet load='3LJJ' size='300' frame='true' align='right' caption='Bovine Trypsin' />
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<!-- PLEASE DO NOT DELETE THIS TEMPLATE -->
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{{Template:Oberholser_Sandbox_Reservation}}
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<!-- PLEASE ADD YOUR CONTENT BELOW HERE -->
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==Introduction==
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<Structure load='1AKE' size='500' frame='true' align='right' caption='Adenylate Kinase' scene='Insert optional scene name here' />
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<scene name='Sandbox_45/Ak_backbone/1'>Backbone</scene>
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<scene name='Sandbox_45/Ak_alpha_helix_2/1'>Alpha Helices</scene>
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<scene name='Sandbox_45/Ak_beta_sheet/1'>Beta Sheet</scene>
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<scene name='Sandbox_45/Ak_alpha_beta_sheet/1'>secondary structure</scene>
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<scene name='Sandbox_45/Ak_hbonds/1'>Hydrogen Bonds</scene>
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<scene name='Sandbox_45/Ak_hydrophobic_residues/1'>Hydrophobic residues</scene>
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<scene name='Sandbox_45/Ak_hydrophilic_residues/1'>Hydrophilic residues</scene>
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== Trypsin ==
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<scene name='Sandbox_45/Ak_hbonds_actual/1'>The Hydrogen Bonds</scene>
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== Secondary structure ==
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<scene name='Sandbox_45/Bt-helix/1'>alpha helices</scene>
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<scene name='Sandbox_45/Bt-sheet1/1'>beta sheets</scene>
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sig of disulfides in overall structure, helix to beta sheet,
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<scene name='Sandbox_45/Helixhold_hbond/1'>hydrogen bonding and water bridges</scene>
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<scene name='Sandbox_45/Helixhold_vanderwaals/1'>van der Waals forces</scene>
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<scene name='Sandbox_45/Btligand/1'>ligands</scene>
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<scene name='Sandbox_45/Btsulfates/1'>sulfate ions</scene>
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key amino acids
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<scene name='Sandbox_45/Lig-waterbridge/1'>water bridges</scene>
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<scene name='Sandbox_45/Lig-hydrogenbond/1'>hydrogen bonds</scene>
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<scene name='Sandbox_45/Lig-metal/1'>metal</scene>
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<scene name='Sandbox_45/Bt-phillic/1'>hydrophilic residues</scene>
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<scene name='Sandbox_45/Bt-phillic/3'>hydrophobic residues</scene>
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<scene name='Sandbox_45/Bt-phillic_waters/2'>water interaction</scene>
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<scene name='Sandbox_45/Bt-phillic_waters/3'>transparent</scene>
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Current revision

Please do NOT make changes to this Sandbox. Sandboxes 30-60 are reserved for use by Biochemistry 410 & 412 at Messiah College taught by Dr. Hannah Tims during Fall 2012 and Spring 2013.

Introduction

Adenylate Kinase

Drag the structure with the mouse to rotate

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