2z5g

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2z5g" size="350" color="white" frame="true" align="right" spinBox="true" caption="2z5g, resolution 1.80&Aring;" /> '''Crystal structure of...)
Current revision (13:22, 1 November 2023) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2z5g.gif|left|200px]]<br /><applet load="2z5g" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2z5g, resolution 1.80&Aring;" />
 
-
'''Crystal structure of T1 lipase F16L mutant'''<br />
 
-
==About this Structure==
+
==Crystal structure of T1 lipase F16L mutant==
-
2Z5G is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_zalihae Geobacillus zalihae] with <scene name='pdbligand=ZN:'>ZN</scene>, <scene name='pdbligand=CA:'>CA</scene> and <scene name='pdbligand=CL:'>CL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Triacylglycerol_lipase Triacylglycerol lipase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.3 3.1.1.3] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z5G OCA].
+
<StructureSection load='2z5g' size='340' side='right'caption='[[2z5g]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2z5g]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_zalihae Geobacillus zalihae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z5G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z5G FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z5g OCA], [https://pdbe.org/2z5g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z5g RCSB], [https://www.ebi.ac.uk/pdbsum/2z5g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z5g ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q842J9_9BACI Q842J9_9BACI]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z5/2z5g_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z5g ConSurf].
 +
<div style="clear:both"></div>
-
==Reference==
+
==See Also==
-
Novel cation-pi interaction revealed by crystal structure of thermoalkalophilic lipase., Matsumura H, Yamamoto T, Leow TC, Mori T, Salleh AB, Basri M, Inoue T, Kai Y, Rahman RN, Proteins. 2008 Feb 1;70(2):592-8. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17932933 17932933]
+
*[[Lipase 3D Structures|Lipase 3D Structures]]
 +
__TOC__
 +
</StructureSection>
[[Category: Geobacillus zalihae]]
[[Category: Geobacillus zalihae]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Triacylglycerol lipase]]
+
[[Category: Inoue T]]
-
[[Category: Inoue, T.]]
+
[[Category: Kai Y]]
-
[[Category: Kai, Y.]]
+
[[Category: Matsumura H]]
-
[[Category: Matsumura, H.]]
+
[[Category: Yamamoto T]]
-
[[Category: Yamamoto, T.]]
+
-
[[Category: CA]]
+
-
[[Category: CL]]
+
-
[[Category: ZN]]
+
-
[[Category: cation-pi interaction]]
+
-
[[Category: hydrolase]]
+
-
[[Category: lipase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 11:25:00 2008''
+

Current revision

Crystal structure of T1 lipase F16L mutant

PDB ID 2z5g

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools