3nrc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:19, 6 September 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3nrc.jpg|left|200px]]
 
-
<!--
+
==Crystal Structure of the Francisella tularensis enoyl-acyl carrier protein reductase (FabI) in complex with NAD+ and triclosan==
-
The line below this paragraph, containing "STRUCTURE_3nrc", creates the "Structure Box" on the page.
+
<StructureSection load='3nrc' size='340' side='right'caption='[[3nrc]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3nrc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Francisella_tularensis_subsp._tularensis_SCHU_S4 Francisella tularensis subsp. tularensis SCHU S4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NRC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NRC FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.101&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=TCL:TRICLOSAN'>TCL</scene></td></tr>
-
{{STRUCTURE_3nrc| PDB=3nrc | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nrc OCA], [https://pdbe.org/3nrc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nrc RCSB], [https://www.ebi.ac.uk/pdbsum/3nrc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nrc ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5NGQ3_FRATT Q5NGQ3_FRATT]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Enoyl-acyl carrier protein reductase (FabI) catalyzes the last rate-limiting step in the elongation cycle of the fatty-acid biosynthesis pathway and has been validated as a potential antimicrobial drug target in Francisella tularensis. The development of new antibiotic therapies is important both to combat potential drug-resistant bioweapons and to address the broader societal problem of increasing antibiotic resistance among many pathogenic bacteria. The crystal structure of FabI from F. tularensis (FtuFabI) in complex with the inhibitor triclosan and the cofactor NAD(+) has been solved to a resolution of 2.1 A. Triclosan is known to effectively inhibit FabI from different organisms. Precise characterization of the mode of triclosan binding is required to develop highly specific inhibitors. Comparison of our structure with the previously determined FtuFabI structure (PDB code 2jjy) which is bound to only NAD(+) reveals the conformation of the substrate-binding loop, electron density for which was missing in the earlier structure, and demonstrates a shift in the conformation of the NAD(+) cofactor. This shift in the position of the phosphate groups allows more room in the active site for substrate or inhibitor to bind and be better accommodated. This information will be crucial for virtual screening studies to identify novel scaffolds for development into new active inhibitors.
-
===Crystal Stucture of the Francisella tularensis enoyl-acyl carrier protein reductase (FabI) in complex with NAD+ and triclosan===
+
Structure of the Francisella tularensis enoyl-acyl carrier protein reductase (FabI) in complex with NAD(+) and triclosan.,Mehboob S, Truong K, Santarsiero BD, Johnson ME Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Nov 1;66(Pt, 11):1436-40. Epub 2010 Oct 27. PMID:21045289<ref>PMID:21045289</ref>
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 3nrc" style="background-color:#fffaf0;"></div>
-
==About this Structure==
+
==See Also==
-
3NRC is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Francisella_tularensis_subsp._tularensis Francisella tularensis subsp. tularensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NRC OCA].
+
*[[Enoyl-Acyl-Carrier Protein Reductase 3D structures|Enoyl-Acyl-Carrier Protein Reductase 3D structures]]
-
[[Category: Francisella tularensis subsp. tularensis]]
+
== References ==
-
[[Category: Johnson, M E.]]
+
<references/>
-
[[Category: Mehboob, S.]]
+
__TOC__
-
[[Category: Santarsiero, B D.]]
+
</StructureSection>
-
[[Category: Truong, K.]]
+
[[Category: Francisella tularensis subsp. tularensis SCHU S4]]
-
[[Category: Enoyl-acyl carrier protein reductase]]
+
[[Category: Large Structures]]
-
[[Category: Nadh binding]]
+
[[Category: Johnson ME]]
-
[[Category: Oxidoreductase]]
+
[[Category: Mehboob S]]
-
[[Category: Rossmann fold]]
+
[[Category: Santarsiero BD]]
-
 
+
[[Category: Truong K]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 10 06:50:39 2010''
+

Current revision

Crystal Structure of the Francisella tularensis enoyl-acyl carrier protein reductase (FabI) in complex with NAD+ and triclosan

PDB ID 3nrc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools