This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ko6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:45, 7 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3ko6.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of yeast free methionine-R-sulfoxide reductase Ykg9 in complex with the substrate==
-
The line below this paragraph, containing "STRUCTURE_3ko6", creates the "Structure Box" on the page.
+
<StructureSection load='3ko6' size='340' side='right'caption='[[3ko6]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ko6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KO6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KO6 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.55&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SME:METHIONINE+SULFOXIDE'>SME</scene></td></tr>
-
{{STRUCTURE_3ko6| PDB=3ko6 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ko6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ko6 OCA], [https://pdbe.org/3ko6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ko6 RCSB], [https://www.ebi.ac.uk/pdbsum/3ko6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ko6 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of yeast free methionine-R-sulfoxide reductase Ykg9 in complex with the substrate===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/FRMSR_YEAST FRMSR_YEAST] Catalyzes the reversible oxidation-reduction of the R-enantiomer of free methionine sulfoxide to methionine. Does not act on S-enantiomer of free methionine sulfoxide or R-enantiomer of dabsylated methionine sulfoxide. Involved in protection against oxidative stress.<ref>PMID:19049972</ref>
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
3KO6 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KO6 OCA].
+
__TOC__
-
[[Category: Saccharomyces cerevisiae]]
+
</StructureSection>
-
[[Category: Chen, Y.]]
+
[[Category: Large Structures]]
-
[[Category: Guo, P C.]]
+
[[Category: Saccharomyces cerevisiae S288C]]
-
[[Category: Ma, X X.]]
+
[[Category: Chen Y]]
-
[[Category: Zhou, C Z.]]
+
[[Category: Guo P-C]]
-
[[Category: Catalytic mechanism]]
+
[[Category: Ma X-X]]
-
[[Category: Methionine-r-sulfoxide reductase]]
+
[[Category: Zhou C-Z]]
-
[[Category: Oxidoreductase]]
+
-
[[Category: Product dissociation]]
+
-
[[Category: Saccharomyces cerevisiae]]
+
-
[[Category: Substrate binding]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Nov 18 00:48:50 2010''
+

Current revision

Crystal structure of yeast free methionine-R-sulfoxide reductase Ykg9 in complex with the substrate

PDB ID 3ko6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools