3ljq

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{{Seed}}
 
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[[Image:3ljq.jpg|left|200px]]
 
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==Crystal Structure of the Glycosylasparaginase T152C apo-precursor==
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The line below this paragraph, containing "STRUCTURE_3ljq", creates the "Structure Box" on the page.
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<StructureSection load='3ljq' size='340' side='right'caption='[[3ljq]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3ljq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Elizabethkingia_meningoseptica Elizabethkingia meningoseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LJQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LJQ FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLY:GLYCINE'>GLY</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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{{STRUCTURE_3ljq| PDB=3ljq | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ljq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ljq OCA], [https://pdbe.org/3ljq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ljq RCSB], [https://www.ebi.ac.uk/pdbsum/3ljq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ljq ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/ASPG_ELIMR ASPG_ELIMR] Cleaves the GlcNAc-Asn bond which joins oligosaccharides to the peptide of asparagine-linked glycoproteins. Requires that the glycosylated asparagine moiety is not substituted on its N-(R1) and C- (R2) terminus.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Glycosylasparaginase belongs to a family of N-terminal nucleophile hydrolases that autoproteolytically generate their mature enzymes from single-chain protein precursors. Previously, based on a precursor structure paused at pre-autoproteolysis stage by a reversible inhibitor (glycine), we proposed a mechanism of intramolecular autoproteolysis. A key structural feature, a highly strained conformation at the scissile peptide bond, had been identified and was hypothesized to be critical for driving autoproteolysis through an N-O acyl shift. To examine this "twist-and-break" hypothesis, we report here a 1. 9-A-resolution structure of an autoproteolysis-active precursor (a T152C mutant) that is free of inhibitor or ligand and is poised to undergo autoproteolysis. The current crystallographic study has provided direct evidence for the natural conformation of the glycosylasparaginase autocatalytic site without influence from any inhibitor or ligand. This finding has confirmed our previous proposal that conformational strain is an intrinsic feature of an active precursor.
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===Crystal Structure of the Glycosylasparaginase T152C apo-precursor===
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Crystallographic snapshot of glycosylasparaginase precursor poised for autoprocessing.,Wang Y, Guo HC J Mol Biol. 2010 Oct 15;403(1):120-30. Epub 2010 Aug 26. PMID:20800597<ref>PMID:20800597</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3ljq" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_20800597}}, adds the Publication Abstract to the page
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*[[Asparaginase 3D structures|Asparaginase 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 20800597 is the PubMed ID number.
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*[[Glycosylasparaginase|Glycosylasparaginase]]
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== References ==
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{{ABSTRACT_PUBMED_20800597}}
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<references/>
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__TOC__
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==About this Structure==
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</StructureSection>
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3LJQ is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Elizabethkingia_meningoseptica Elizabethkingia meningoseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LJQ OCA].
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==Reference==
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<ref group="xtra">PMID:20800597</ref><references group="xtra"/>
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[[Category: Elizabethkingia meningoseptica]]
[[Category: Elizabethkingia meningoseptica]]
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[[Category: Guo, H C.]]
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[[Category: Large Structures]]
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[[Category: Wang, Y.]]
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[[Category: Guo H-C]]
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[[Category: Active precursor]]
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[[Category: Wang Y]]
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[[Category: Aspartylglucosylaminase]]
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[[Category: Autoproteolysis]]
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[[Category: Catalytic mechanism]]
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[[Category: Constrained conformation]]
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[[Category: Hydrolase]]
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[[Category: N-terminal nucleophile hydrolase]]
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[[Category: Precursor structure]]
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[[Category: Reversible inhibitor]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 24 14:14:14 2010''
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Current revision

Crystal Structure of the Glycosylasparaginase T152C apo-precursor

PDB ID 3ljq

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