3bci

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(New page: 200px<br /><applet load="3bci" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bci, resolution 1.810&Aring;" /> '''Crystal Structure o...)
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[[Image:3bci.jpg|left|200px]]<br /><applet load="3bci" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="3bci, resolution 1.810&Aring;" />
 
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'''Crystal Structure of Staphylococcus aureus DsbA'''<br />
 
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==Overview==
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==Crystal Structure of Staphylococcus aureus DsbA==
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Bacterial Dsb proteins catalyse the in vivo formation of disulfide bonds, a critical step in the stability and activity of many proteins. Most, studies on Dsb proteins have focused on Gram-negative bacteria and thus, the process of oxidative folding in Gram-positive bacteria is poorly, understood. To help elucidate this process in Gram-positive bacteria, DsbA, from Staphylococcus aureus (SaDsbA) has been focused on. Here, the, expression, purification, crystallization and preliminary diffraction, analysis of SaDsbA are reported. SaDsbA crystals diffract to a resolution, limit of 2.1 A and belong to the hexagonal space group P6(5) or P6(1), with unit-cell parameters a = b = 72.1, c = 92.1 A and one molecule in the, asymmetric unit (64% solvent content).
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<StructureSection load='3bci' size='340' side='right'caption='[[3bci]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3bci]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BCI FirstGlance]. <br>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1dsb|1dsb]], [[1bed|1bed]], [[3bck|3bck]], [[3bd2|3bd2]]</div></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AAG41993 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bci FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bci OCA], [https://pdbe.org/3bci PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bci RCSB], [https://www.ebi.ac.uk/pdbsum/3bci PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bci ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bc/3bci_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bci ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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In Gram-negative bacteria, the introduction of disulfide bonds into folding proteins occurs in the periplasm and is catalyzed by donation of an energetically unstable disulfide from DsbA, which is subsequently re-oxidized through interaction with DsbB. Gram-positive bacteria lack a classic periplasm but nonetheless encode Dsb-like proteins. Staphylococcus aureus encodes just one Dsb protein, a DsbA, and no DsbB. Here we report the crystal structure of S. aureus DsbA (SaDsbA), which incorporates a thioredoxin fold with an inserted helical domain, like its Escherichia coli counterpart EcDsbA, but it lacks the characteristic hydrophobic patch and has a truncated binding groove near the active site. These findings suggest that SaDsbA has a different substrate specificity than EcDsbA. Thermodynamic studies indicate that the oxidized and reduced forms of SaDsbA are energetically equivalent, in contrast to the energetically unstable disulfide form of EcDsbA. Further, the partial complementation of EcDsbA by SaDsbA is independent of EcDsbB and biochemical assays show that SaDsbA does not interact with EcDsbB. The identical stabilities of oxidized and reduced SaDsbA may facilitate direct re-oxidation of the protein by extracellular oxidants, without the need for DsbB.
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==About this Structure==
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Staphylococcus aureus DsbA does not have a destabilizing disulfide. A new paradigm for bacterial oxidative folding.,Heras B, Kurz M, Jarrott R, Shouldice SR, Frei P, Robin G, Cemazar M, Thony-Meyer L, Glockshuber R, Martin JL J Biol Chem. 2008 Feb 15;283(7):4261-71. Epub 2007 Dec 12. PMID:18077463<ref>PMID:18077463</ref>
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3BCI is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCI OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Expression and crystallization of DsbA from Staphylococcus aureus., Heras B, Kurz M, Jarrott R, Byriel KA, Jones A, Thony-Meyer L, Martin JL, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Nov 1;63(Pt, 11):953-6. Epub 2007 Oct 24. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=18007049 18007049]
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</div>
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[[Category: Single protein]]
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<div class="pdbe-citations 3bci" style="background-color:#fffaf0;"></div>
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[[Category: Staphylococcus aureus]]
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[[Category: Heras, B.]]
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[[Category: Martin, J.L.]]
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[[Category: Thony-Meyer, L.]]
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[[Category: protein folding]]
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[[Category: redox active centre]]
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[[Category: redox protein]]
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[[Category: thiol-disulfide oxidoreductase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 11:47:57 2008''
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==See Also==
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*[[Protein disulfide oxidoreductase|Protein disulfide oxidoreductase]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Heras, B]]
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[[Category: Martin, J L]]
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[[Category: Thony-Meyer, L]]
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[[Category: Oxidoreductase]]
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[[Category: Protein folding]]
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[[Category: Redox active centre]]
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[[Category: Redox protein]]
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[[Category: Thiol-disulfide oxidoreductase]]

Current revision

Crystal Structure of Staphylococcus aureus DsbA

PDB ID 3bci

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