This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3bcx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="3bcx" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bcx, resolution 2.40&Aring;" /> '''E1 Dehydrase'''<br /...)
Current revision (12:07, 30 August 2023) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3bcx.gif|left|200px]]<br /><applet load="3bcx" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="3bcx, resolution 2.40&Aring;" />
 
-
'''E1 Dehydrase'''<br />
 
-
==About this Structure==
+
==E1 Dehydrase==
-
3BCX is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis Yersinia pseudotuberculosis] with <scene name='pdbligand=FE:'>FE</scene> and <scene name='pdbligand=BEN:'>BEN</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCX OCA].
+
<StructureSection load='3bcx' size='340' side='right'caption='[[3bcx]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
[[Category: Single protein]]
+
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3bcx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis Yersinia pseudotuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BCX FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bcx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bcx OCA], [https://pdbe.org/3bcx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bcx RCSB], [https://www.ebi.ac.uk/pdbsum/3bcx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bcx ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q57323_YERPU Q57323_YERPU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bc/3bcx_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bcx ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Yersinia pseudotuberculosis]]
[[Category: Yersinia pseudotuberculosis]]
-
[[Category: Smith, P.]]
+
[[Category: Smith P]]
-
[[Category: Tsai, S-C.]]
+
[[Category: Tsai S-C]]
-
[[Category: BEN]]
+
-
[[Category: FE]]
+
-
[[Category: aspartate aminotransferase fold]]
+
-
[[Category: iron]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 12:01:26 2008''
+

Current revision

E1 Dehydrase

PDB ID 3bcx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools