3bdu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="3bdu" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bdu, resolution 1.90&Aring;" /> '''Crystal structure of...)
Current revision (08:47, 30 October 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3bdu.gif|left|200px]]<br /><applet load="3bdu" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="3bdu, resolution 1.90&Aring;" />
 
-
'''Crystal structure of protein Q6D8G1 at the resolution 1.9 A. Northeast Structural Genomics Consortium target EwR22A.'''<br />
 
-
==About this Structure==
+
==Crystal structure of protein Q6D8G1 at the resolution 1.9 A. Northeast Structural Genomics Consortium target EwR22A.==
-
3BDU is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Erwinia_carotovora_subsp._atroseptica_scri1043 Erwinia carotovora subsp. atroseptica scri1043]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BDU OCA].
+
<StructureSection load='3bdu' size='340' side='right'caption='[[3bdu]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
[[Category: Erwinia carotovora subsp. atroseptica scri1043]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[3bdu]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Pectobacterium_atrosepticum_SCRI1043 Pectobacterium atrosepticum SCRI1043]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BDU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BDU FirstGlance]. <br>
-
[[Category: Acton, T.B.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
[[Category: Baran, M.C.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Cunningham, K.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bdu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bdu OCA], [https://pdbe.org/3bdu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bdu RCSB], [https://www.ebi.ac.uk/pdbsum/3bdu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bdu ProSAT], [https://www.topsan.org/Proteins/NESGC/3bdu TOPSAN]</span></td></tr>
-
[[Category: Fang, Y.]]
+
</table>
-
[[Category: Hunt, J.F.]]
+
== Function ==
-
[[Category: Kuzin, A.P.]]
+
[https://www.uniprot.org/uniprot/Q6D8G1_PECAS Q6D8G1_PECAS]
-
[[Category: Liu, J.]]
+
== Evolutionary Conservation ==
-
[[Category: Montelione, G.T.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
+
Check<jmol>
-
[[Category: Owens, L.]]
+
<jmolCheckbox>
-
[[Category: Rost, B.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bd/3bdu_consurf.spt"</scriptWhenChecked>
-
[[Category: Seetharaman, J.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Su, M.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Tong, L.]]
+
</jmolCheckbox>
-
[[Category: Wang, D.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bdu ConSurf].
-
[[Category: Xiao, R.]]
+
<div style="clear:both"></div>
-
[[Category: lipoprotein]]
+
__TOC__
-
[[Category: nesg]]
+
</StructureSection>
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Large Structures]]
-
[[Category: protein structure initiative]]
+
[[Category: Pectobacterium atrosepticum SCRI1043]]
-
[[Category: psi-2]]
+
[[Category: Acton TB]]
-
[[Category: q6d8g1]]
+
[[Category: Baran MC]]
-
[[Category: structural genomics]]
+
[[Category: Cunningham K]]
-
[[Category: x_ray]]
+
[[Category: Fang Y]]
-
 
+
[[Category: Hunt JF]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 12:01:40 2008''
+
[[Category: Kuzin AP]]
 +
[[Category: Liu J]]
 +
[[Category: Montelione GT]]
 +
[[Category: Owens L]]
 +
[[Category: Rost B]]
 +
[[Category: Seetharaman J]]
 +
[[Category: Su M]]
 +
[[Category: Tong L]]
 +
[[Category: Wang D]]
 +
[[Category: Xiao R]]

Current revision

Crystal structure of protein Q6D8G1 at the resolution 1.9 A. Northeast Structural Genomics Consortium target EwR22A.

PDB ID 3bdu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3bdu"
Personal tools