3l1p

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{{Seed}}
 
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[[Image:3l1p.jpg|left|200px]]
 
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==POU protein:DNA complex==
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The line below this paragraph, containing "STRUCTURE_3l1p", creates the "Structure Box" on the page.
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<StructureSection load='3l1p' size='340' side='right'caption='[[3l1p]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3l1p]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L1P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3L1P FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3l1p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l1p OCA], [https://pdbe.org/3l1p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3l1p RCSB], [https://www.ebi.ac.uk/pdbsum/3l1p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3l1p ProSAT]</span></td></tr>
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{{STRUCTURE_3l1p| PDB=3l1p | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PO5F1_MOUSE PO5F1_MOUSE] Transcription factor that binds to the octamer motif (5'-ATTTGCAT-3'). Forms a trimeric complex with SOX2 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206. Critical for early embryogenesis and for embryonic stem cell pluripotency.<ref>PMID:17496161</ref> <ref>PMID:17525163</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Terminally differentiated cells can be reprogrammed to pluripotency by the forced expression of Oct4, Sox2, Klf4 and c-Myc. However, it remains unknown how this leads to the multitude of epigenetic changes observed during the reprogramming process. Interestingly, Oct4 is the only factor that cannot be replaced by other members of the same family to induce pluripotency. To understand the unique role of Oct4 in reprogramming, we determined the structure of its POU domain bound to DNA. We show that the linker between the two DNA-binding domains is structured as an alpha-helix and exposed to the protein's surface, in contrast to the unstructured linker of Oct1. Point mutations in this alpha-helix alter or abolish the reprogramming activity of Oct4, but do not affect its other fundamental properties. On the basis of mass spectrometry studies of the interactome of wild-type and mutant Oct4, we propose that the linker functions as a protein-protein interaction interface and plays a crucial role during reprogramming by recruiting key epigenetic players to Oct4 target genes. Thus, we provide molecular insights to explain how Oct4 contributes to the reprogramming process.
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===POU protein:DNA complex===
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A unique Oct4 interface is crucial for reprogramming to pluripotency.,Esch D, Vahokoski J, Groves MR, Pogenberg V, Cojocaru V, Vom Bruch H, Han D, Drexler HC, Arauzo-Bravo MJ, Ng CK, Jauch R, Wilmanns M, Scholer HR Nat Cell Biol. 2013 Mar;15(3):295-301. doi: 10.1038/ncb2680. Epub 2013 Feb 3. PMID:23376973<ref>PMID:23376973</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3l1p" style="background-color:#fffaf0;"></div>
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==About this Structure==
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==See Also==
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3L1P is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L1P OCA].
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*[[OCT4 and SOX2 transcription factors|OCT4 and SOX2 transcription factors]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
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[[Category: Groves, M R.]]
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[[Category: Groves MR]]
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[[Category: Pogenberg, V.]]
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[[Category: Pogenberg V]]
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[[Category: Vahokoski, J.]]
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[[Category: Vahokoski J]]
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[[Category: Wilmanns, M.]]
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[[Category: Wilmanns M]]
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[[Category: Embryonic]]
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[[Category: Pore]]
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[[Category: Pou]]
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[[Category: Stem cell]]
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[[Category: Transcription factor dna complex]]
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[[Category: Transcription-dna complex]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 15 08:40:47 2010''
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Current revision

POU protein:DNA complex

PDB ID 3l1p

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