2e1d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2e1d" size="350" color="white" frame="true" align="right" spinBox="true" caption="2e1d, resolution 2.00&Aring;" /> '''Crystal structure of...)
Current revision (08:33, 25 October 2023) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2e1d.jpg|left|200px]]<br /><applet load="2e1d" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2e1d, resolution 2.00&Aring;" />
 
-
'''Crystal structure of mouse transaldolase'''<br />
 
-
==About this Structure==
+
==Crystal structure of mouse transaldolase==
-
2E1D is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] with <scene name='pdbligand=SO3:'>SO3</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Transaldolase Transaldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.2.1.2 2.2.1.2] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E1D OCA].
+
<StructureSection load='2e1d' size='340' side='right'caption='[[2e1d]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
[[Category: Mus musculus]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2e1d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E1D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E1D FirstGlance]. <br>
-
[[Category: Transaldolase]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
[[Category: Chen, L.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO3:SULFITE+ION'>SO3</scene></td></tr>
-
[[Category: Kishishita, S.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e1d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e1d OCA], [https://pdbe.org/2e1d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e1d RCSB], [https://www.ebi.ac.uk/pdbsum/2e1d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e1d ProSAT], [https://www.topsan.org/Proteins/RSGI/2e1d TOPSAN]</span></td></tr>
-
[[Category: Liu, Z.J.]]
+
</table>
-
[[Category: Murayama, K.]]
+
== Function ==
-
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
+
[https://www.uniprot.org/uniprot/TALDO_MOUSE TALDO_MOUSE] Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (By similarity).
-
[[Category: Shirouzu, M.]]
+
== Evolutionary Conservation ==
-
[[Category: Wang, B.C.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Yokoyama, S.]]
+
Check<jmol>
-
[[Category: SO3]]
+
<jmolCheckbox>
-
[[Category: national project on protein structural and functional analyses]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e1/2e1d_consurf.spt"</scriptWhenChecked>
-
[[Category: nppsfa]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: pentose phosphate pathway]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: riken structural genomics/proteomics initiative]]
+
</jmolCheckbox>
-
[[Category: rsgi]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e1d ConSurf].
-
[[Category: structural genomics]]
+
<div style="clear:both"></div>
-
[[Category: transaldolase]]
+
-
[[Category: transferase]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 12:13:38 2008''
+
==See Also==
 +
*[[Transaldolase 3D structures|Transaldolase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Mus musculus]]
 +
[[Category: Chen L]]
 +
[[Category: Kishishita S]]
 +
[[Category: Liu ZJ]]
 +
[[Category: Murayama K]]
 +
[[Category: Shirouzu M]]
 +
[[Category: Wang BC]]
 +
[[Category: Yokoyama S]]

Current revision

Crystal structure of mouse transaldolase

PDB ID 2e1d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools