1j9g

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1j9g" [edit=sysop:move=sysop])
Current revision (07:37, 7 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1j9g.png|left|200px]]
 
-
<!--
+
==Low Temperature (100K) Crystal Structure of Flavodoxin D. vulgaris S64C Mutant, monomer oxidised, at 2.4 Angstrom Resolution==
-
The line below this paragraph, containing "STRUCTURE_1j9g", creates the "Structure Box" on the page.
+
<StructureSection load='1j9g' size='340' side='right'caption='[[1j9g]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1j9g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J9G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J9G FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-
{{STRUCTURE_1j9g| PDB=1j9g | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j9g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j9g OCA], [https://pdbe.org/1j9g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j9g RCSB], [https://www.ebi.ac.uk/pdbsum/1j9g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j9g ProSAT]</span></td></tr>
-
 
+
</table>
-
===Low Temperature (100K) Crystal Structure of Flavodoxin D. vulgaris S64C Mutant, monomer oxidised, at 2.4 Angstrom Resolution===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/FLAV_DESVH FLAV_DESVH] Low-potential electron donor to a number of redox enzymes.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_12351822}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 12351822 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j9/1j9g_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_12351822}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
[[1j9g]] is a 1 chain structure of [[Flavodoxin]] with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J9G OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j9g ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Flavodoxin]]
+
*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:12351822</ref><references group="xtra"/>
+
[[Category: Desulfovibrio vulgaris]]
[[Category: Desulfovibrio vulgaris]]
-
[[Category: Artali, R.]]
+
[[Category: Large Structures]]
-
[[Category: Bombieri, G.]]
+
[[Category: Artali R]]
-
[[Category: Cavazzini, D.]]
+
[[Category: Bombieri G]]
-
[[Category: Gilardi, G.]]
+
[[Category: Cavazzini D]]
-
[[Category: Meneghetti, F.]]
+
[[Category: Gilardi G]]
-
[[Category: Rossi, G L.]]
+
[[Category: Meneghetti F]]
-
[[Category: Sadeghi, S J.]]
+
[[Category: Rossi GL]]
-
[[Category: Alpha-helice]]
+
[[Category: Sadeghi SJ]]
-
[[Category: Beta-sheet]]
+
-
[[Category: Electron transport]]
+

Current revision

Low Temperature (100K) Crystal Structure of Flavodoxin D. vulgaris S64C Mutant, monomer oxidised, at 2.4 Angstrom Resolution

PDB ID 1j9g

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools