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2pmk

From Proteopedia

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[[Image:2pmk.png|left|200px]]
 
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==Crystal structures of an isolated ABC-ATPase in complex with TNP-ADP==
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The line below this paragraph, containing "STRUCTURE_2pmk", creates the "Structure Box" on the page.
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<StructureSection load='2pmk' size='340' side='right'caption='[[2pmk]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2pmk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PMK FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=128:SPIRO(2,4,6-TRINITROBENZENE[1,2A]-2O,3O-METHYLENE-ADENINE-TRIPHOSPHATE'>128</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr>
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{{STRUCTURE_2pmk| PDB=2pmk | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pmk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pmk OCA], [https://pdbe.org/2pmk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pmk RCSB], [https://www.ebi.ac.uk/pdbsum/2pmk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pmk ProSAT]</span></td></tr>
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</table>
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===Crystal structures of an isolated ABC-ATPase in complex with TNP-ADP===
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== Function ==
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[https://www.uniprot.org/uniprot/HLYBP_ECOLX HLYBP_ECOLX] Part of the ABC transporter complex HlyBD involved in hemolysin export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 18155559 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pm/2pmk_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_18155559}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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[[2pmk]] is a 1 chain structure of [[ABC transporter]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMK OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pmk ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[ABC transporter]]
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*[[ABC transporter 3D structures|ABC transporter 3D structures]]
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__TOC__
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==Reference==
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</StructureSection>
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<ref group="xtra">PMID:18155559</ref><references group="xtra"/>
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[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Holland, I B.]]
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[[Category: Large Structures]]
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[[Category: Jenewein, S.]]
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[[Category: Holland IB]]
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[[Category: Oswald, C.]]
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[[Category: Jenewein S]]
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[[Category: Schmitt, L.]]
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[[Category: Oswald C]]
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[[Category: Abc-transporter]]
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[[Category: Schmitt L]]
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[[Category: Atpase]]
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[[Category: Nbd]]
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[[Category: Tnp-nucleotide]]
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[[Category: Transport protein]]
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Current revision

Crystal structures of an isolated ABC-ATPase in complex with TNP-ADP

PDB ID 2pmk

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