2qua

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2qua" [edit=sysop:move=sysop])
Current revision (09:17, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qua.png|left|200px]]
 
-
<!--
+
==Crystal structure of LipA from Serratia marcescens==
-
The line below this paragraph, containing "STRUCTURE_2qua", creates the "Structure Box" on the page.
+
<StructureSection load='2qua' size='340' side='right'caption='[[2qua]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2qua]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Serratia_marcescens Serratia marcescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QUA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QUA FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
{{STRUCTURE_2qua| PDB=2qua | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qua FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qua OCA], [https://pdbe.org/2qua PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qua RCSB], [https://www.ebi.ac.uk/pdbsum/2qua PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qua ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of LipA from Serratia marcescens===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q59933_SERMA Q59933_SERMA]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_17728256}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 17728256 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qu/2qua_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_17728256}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
[[2qua]] is a 1 chain structure of [[Lipase]] with sequence from [http://en.wikipedia.org/wiki/Serratia_marcescens Serratia marcescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QUA OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qua ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Lipase]]
+
*[[Lipase 3D Structures|Lipase 3D Structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:17728256</ref><references group="xtra"/>
+
[[Category: Large Structures]]
[[Category: Serratia marcescens]]
[[Category: Serratia marcescens]]
-
[[Category: Triacylglycerol lipase]]
+
[[Category: Baumann U]]
-
[[Category: Baumann, U.]]
+
[[Category: Meier R]]
-
[[Category: Meier, R.]]
+
-
[[Category: Alpha/beta hydrolase]]
+
-
[[Category: Beta roll]]
+
-
[[Category: Helical hairpin]]
+

Current revision

Crystal structure of LipA from Serratia marcescens

PDB ID 2qua

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qua"
Personal tools