2fkx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:40, 1 May 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2fkx.png|left|200px]]
 
-
<!--
+
==Ribosomal protein s15 from thermus thermophilus, nmr recalculated structure==
-
The line below this paragraph, containing "STRUCTURE_2fkx", creates the "Structure Box" on the page.
+
<StructureSection load='2fkx' size='340' side='right'caption='[[2fkx]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2fkx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FKX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FKX FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fkx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fkx OCA], [https://pdbe.org/2fkx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fkx RCSB], [https://www.ebi.ac.uk/pdbsum/2fkx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fkx ProSAT]</span></td></tr>
-
{{STRUCTURE_2fkx| PDB=2fkx | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Ribosomal protein s15 from thermus thermophilus, nmr recalculated structure===
+
[https://www.uniprot.org/uniprot/RS15_THETH RS15_THETH] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (By similarity).
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_17259282}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 17259282 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fk/2fkx_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_17259282}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fkx ConSurf].
-
[[2fkx]] is a 1 chain structure of [[Ribosomal protein S15]] with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FKX OCA].
+
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Ribosomal protein S15]]
+
*[[Ribosomal protein S15|Ribosomal protein S15]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:17259282</ref><references group="xtra"/>
+
[[Category: Large Structures]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
-
[[Category: Malliavin, T E.]]
+
[[Category: Malliavin TE]]
-
[[Category: Ribosomal protein]]
+
-
[[Category: Rna-binding protein]]
+
-
[[Category: Rrna-binding protein]]
+
-
[[Category: Structural protein]]
+

Current revision

Ribosomal protein s15 from thermus thermophilus, nmr recalculated structure

PDB ID 2fkx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools