3k5s

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[[Image:3k5s.png|left|200px]]
 
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==Crystal structure of chicken T-cadherin EC1 EC2==
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The line below this paragraph, containing "STRUCTURE_3k5s", creates the "Structure Box" on the page.
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<StructureSection load='3k5s' size='340' side='right'caption='[[3k5s]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3k5s]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K5S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K5S FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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{{STRUCTURE_3k5s| PDB=3k5s | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k5s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k5s OCA], [https://pdbe.org/3k5s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k5s RCSB], [https://www.ebi.ac.uk/pdbsum/3k5s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k5s ProSAT]</span></td></tr>
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</table>
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===Crystal structure of chicken T-cadherin EC1 EC2===
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== Function ==
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[https://www.uniprot.org/uniprot/CAD13_CHICK CAD13_CHICK] Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. May act as a negative regulator of neural cell growth.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 20190755 is the PubMed ID number.
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/3k5s_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_20190755}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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[[3k5s]] is a 2 chain structure of [[Cadherin]] with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K5S OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k5s ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[Cadherin]]
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*[[Cadherin 3D structures|Cadherin 3D structures]]
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__TOC__
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==Reference==
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</StructureSection>
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<ref group="xtra">PMID:20190755</ref><references group="xtra"/>
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[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
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[[Category: Ciatto, C.]]
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[[Category: Large Structures]]
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[[Category: Shapiro, L.]]
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[[Category: Ciatto C]]
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[[Category: Alternative splicing]]
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[[Category: Shapiro L]]
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[[Category: Cadherin]]
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[[Category: Calcium]]
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[[Category: Cell adhesion]]
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[[Category: Cell membrane]]
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[[Category: Cleavage on pair of basic residue]]
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[[Category: Glycoprotein]]
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[[Category: Gpi-anchor]]
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[[Category: Lipoprotein]]
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[[Category: Membrane]]
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[[Category: Structural protein]]
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Current revision

Crystal structure of chicken T-cadherin EC1 EC2

PDB ID 3k5s

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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