This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Template:STRUCTURE 2pav

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:31, 6 March 2013) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
{{Structure
{{Structure
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2pav]], [[Resolution|resolution]] 1.80&Aring; (<scene name='initialview01'>default scene</scene>)}}}
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2pav]], [[Resolution|resolution]] 1.80&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-
|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Ca+A+601'>AC1</scene> and <scene name='pdbsite=AC2:Binding+Site+For+Residue+Atp+A+602'>AC2</scene>
 
|LIGAND= <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>
|LIGAND= <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>
|GENE= PFN1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
|GENE= PFN1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-
|NONSTDRES=<scene name='pdbligand=HIC:'>HIC</scene>
+
|NONSTDRES=<scene name='pdbligand=HIC:4-METHYL-HISTIDINE'>HIC</scene>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pav FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pav OCA], [http://www.ebi.ac.uk/pdbsum/2pav PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2pav RCSB]</span>
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pav FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pav OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2pav RCSB], [http://www.ebi.ac.uk/pdbsum/2pav PDBsum]</span>
-
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004000 Ipr004000], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004001 Ipr004001], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002097 Ipr002097], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005454 Ipr005454]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00022 PF00022], [http://pfam.sanger.ac.uk/family?acc=PF00235 PF00235]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P68135 P68135], [http://ca.expasy.org/cgi-bin/niceprot.pl?P07737 P07737], [http://ca.expasy.org/cgi-bin/niceprot.pl?P50552 P50552]</span>
+
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/2pavA03 2Pava03], [http://www.cathdb.info/domain/2pavA01 2Pava01], [http://www.cathdb.info/domain/2pavA02 2Pava02], [http://www.cathdb.info/domain/2pavP00 2Pavp00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004001 Ipr004001], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004000 Ipr004000], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR020902 Ipr020902], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR027310 Ipr027310], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005454 Ipr005454], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005455 Ipr005455], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017354 Ipr017354], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014885 Ipr014885], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000697 Ipr000697], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011993 Ipr011993]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00022 PF00022], [http://pfam.sanger.ac.uk/family?acc=PF00235 PF00235]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=149350 d2pavp1]</span>
|uPDB=2PAV|CONSURF={{!}}-
|uPDB=2PAV|CONSURF={{!}}-
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]

Current revision

Drag the structure with the mouse to rotate
2pav, resolution 1.80Å ()
Ligands: ,
Non-Standard Residues:
Gene: PFN1 (Homo sapiens)
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_2pav"
Personal tools