1c06

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1c06" [edit=sysop:move=sysop])
Current revision (15:37, 13 March 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1c06.png|left|200px]]
 
-
<!--
+
==SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN S4 DELTA 41, REFINED WITH DIPOLAR COUPLINGS (ENSEMBLE OF 16 STRUCTURES)==
-
The line below this paragraph, containing "STRUCTURE_1c06", creates the "Structure Box" on the page.
+
<StructureSection load='1c06' size='340' side='right'caption='[[1c06]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1c06]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C06 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1C06 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1c06 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c06 OCA], [https://pdbe.org/1c06 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1c06 RCSB], [https://www.ebi.ac.uk/pdbsum/1c06 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1c06 ProSAT]</span></td></tr>
-
{{STRUCTURE_1c06| PDB=1c06 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN S4 DELTA 41, REFINED WITH DIPOLAR COUPLINGS (ENSEMBLE OF 16 STRUCTURES)===
+
[https://www.uniprot.org/uniprot/RS4_GEOSE RS4_GEOSE] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (By similarity).[HAMAP-Rule:MF_01306_B] With S5 and S12 plays an important role in translational accuracy (By similarity).[HAMAP-Rule:MF_01306_B]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_10493882}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 10493882 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c0/1c06_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_10493882}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1c06 ConSurf].
-
[[1c06]] is a 1 chain structure of [[Ribosomal protein S4]] with sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C06 OCA].
+
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Ribosomal protein S4]]
+
*[[Ribosomal protein S4|Ribosomal protein S4]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:10493882</ref><references group="xtra"/>
+
[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
-
[[Category: Draper, D E.]]
+
[[Category: Large Structures]]
-
[[Category: Gerstner, R B.]]
+
[[Category: Draper DE]]
-
[[Category: Markus, M A.]]
+
[[Category: Gerstner RB]]
-
[[Category: Torchia, D A.]]
+
[[Category: Markus MA]]
-
[[Category: Possible helix-turn helix motif]]
+
[[Category: Torchia DA]]
-
[[Category: Ribosome]]
+
-
[[Category: Two subdomain]]
+
-
[[Category: Unique topology]]
+

Current revision

SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN S4 DELTA 41, REFINED WITH DIPOLAR COUPLINGS (ENSEMBLE OF 16 STRUCTURES)

PDB ID 1c06

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools